Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00486 ATGGAAGATCCAGAGGAAGAGGAGCTTCTGAATCTCAGCCTCTCAGTTTCTGCAGGTAGATCATCAGAAAGAAAAAAGAAAGGCAAGATGATGATGAATCATCATCACCATCATCATCTTCTTCACCAGTACGAACAAGCAGGCTTCGAAGGCAAGATCTTCAGGCTTCTTCAAACCAGAGAGCAGATGCTTCGTTCGGATCACAACCTCATGATGATGATGAGAAATAATCGAACTCGAGGTGGTGGAGGTGGATTAGATCAGGATGGTAGTAATAATAATAATAATGGCCTCCCTCTGATTCATCTTCTTCTCAGTACGGCCACTTGCGTCGACGACGCCAACTTTAACACTGCCCTAGATAACCTCACTCAGCTTTACCAAACTGTCTCCCTCACCGGCGACTCCGTCCAGCGAGTGGTCGCTTACTTCGGTGACGGCCTCGCCGCCCGTCTCCTCACTAGAAAATCCCCCTTCTACGACATGCTCATGGAAGAACCGACTAGCGAGGAAGAATTCTTAGCCTTCACTGACCTTTATAGAGTGTCGCCTTACTACCAATTCGCCCACTTCACGGCGAACCAAGCCATCCTCGAGGCATTCGAGAACGAGGAAGACAAGAACAACAAAGCATTACACGTCGTCGACTTCGATGTCTCCTATGGTTTCCAATGGCCCTCACTCATCCAATCTCTCTCGGAGAAGGCCACCGCCGGTAACAGAATATTCCTCCGAATCACCGGCTTCGGGAAGAATCTCAAAGAGCTTCAAGAAACAGAATCTCGCCTGGTCAGCTTCTCCAAGGGATTCACCAATTTAGTGTTTGAATTCCAAGGCCTGCTTCGAGGATCGCGAGTGATTAACCTGAGGAAGAAGAAGAATGAAACAGTGTGTGTTAATCTGGTGTCATACTTGAACACATTGAGTAGTTTCATGAAGATTTCTGACACATTGGGATTTGTTCATTCTCTGAATCCCTCCATTGTTGTTCTTGTGGAGCAAGAAGGAAGTCGAAGCCCGAGAACGTTCTTGTCCAGATTCACTGATTCGTTGCATTATTTCGCCGCCATGTTTGATTCTCTTGATGATTGCTTGCCCATGGAAAGTGCGGAGAGGTTGAGGATTGAGAAGAAGCTTCTAGGGAAAGAGATTAAGGCTATGTTGAATTACTACGACGTGGACGGTGTGGATTGTCCCAAATATGAGAGGATGGAGACATGGAAGGCCAGGATGGAGAGCCATAGGTTTATTGGAACCAAAGTGAGTTCAAAGGCTTTGATTCAGGCCAAGTTGCTTTTGAAGATGAGGACTCATTATTCGCCGCTTCAGTTTGAAGATGATGGGGGTGGCGGCGGCGGGGGTGGCGGTTTCAGGGTTTCGGAGAGAGACGAAGGAAGAGCGATTTCCTTGGGATGGCAAAATAGGTTTCTTCTTACAGTCTCGGCATGGCAGATAGAAGTGTGA 1464 0.474 MEDPEEEELLNLSLSVSAGRSSERKKKGKMMMNHHHHHHLLHQYEQAGFEGKIFRLLQTREQMLRSDHNLMMMMRNNRTRGGGGGLDQDGSNNNNNGLPLIHLLLSTATCVDDANFNTALDNLTQLYQTVSLTGDSVQRVVAYFGDGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFENEEDKNNKALHVVDFDVSYGFQWPSLIQSLSEKATAGNRIFLRITGFGKNLKELQETESRLVSFSKGFTNLVFEFQGLLRGSRVINLRKKKNETVCVNLVSYLNTLSSFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRTFLSRFTDSLHYFAAMFDSLDDCLPMESAERLRIEKKLLGKEIKAMLNYYDVDGVDCPKYERMETWKARMESHRFIGTKVSSKALIQAKLLLKMRTHYSPLQFEDDGGGGGGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQIEV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00486 487 ProSiteProfiles GRAS family profile. 91 484 IPR005202 -
Accr2g00486 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 85 479 IPR005202 -
Accr2g00486 487 Pfam GRAS domain family 100 484 IPR005202 -
Accr2g00486 487 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00486 Accr-Chr2 10847024 10848487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00486 92 485 GRAS Transcription Factor Family AT1G14920 32.924 6.14e-53 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr2g00486 GRAS 3.9e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00486 - - gmx:100809458 697.967