Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00476 ATGGGGGATATGGAATCATGTGTGCCACCAGGATTTAGATTCCGTCCAACAGAGGAAGAACTTGTAGGATATTACCTCAAGAGGAAGATTAACTCACTCAAAATCAACCTAGATGTCATTGTTGAGCTAGATCTCTACAAAATTGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAACGAGTGGTATTTTTTCAGCCACAAGGACAAGAAGTATCCGACAGGGACAAGGACGAATAGGGCGACAGCAGCGGGGTTCTGGAAGGCGACAGGGAGGGACAAGGCGGTGATGTCGAAGAACAAGATCATAGGAATGAGGAAGACTCTTGTGTTCTACCAGGGACGTGCCCCTAATGGCAGGAAATCTGACTGGATCATGCATGAATATCGCCTCCAATCTTCTGAACATGCCCCTCCTCAGGCAAAAGGATGGGTTGTGTGTAGAGCATTCATAAAGCCAAGTCCAAGTCATATGAGGCCAGGTTTTGAAGCAGCACAGTGCTATTTCAGAGACCATGAGATCATCAACAGCCATGGAAGGCCCTTGATCTCTTCATTTTCTGAGATTCTGAATCAAACCCATCACTTTCCAATGAATAGCAATACCTCTCATCGTCATCACCAACCTTTGATCAATTTGGATCAGCAGAACCAACAACTAGTTGATCTTCCTCAACTAGATAGCCCTAGTCTGGGAATAAGATCATCATCAGATAATAATAATTATGGCCAAACCAATATTAATAATAATATTGGGGAAGAATATTACAGTGACGACATGGAAAGCTTGGACCATTTTTTTGCTTCAAATCTCACAGATACATCAACTTCTGGTTCTGCTAATTTCTTTGCACACACCAACTTTCCCATGAATATGATACCTGATCATAACAGTGAAGCAAGCCAAGCCCTAGGATTATGCTTTCCTGACTCTTCATAG 954 0.4287 MGDMESCVPPGFRFRPTEEELVGYYLKRKINSLKINLDVIVELDLYKIEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNKIIGMRKTLVFYQGRAPNGRKSDWIMHEYRLQSSEHAPPQAKGWVVCRAFIKPSPSHMRPGFEAAQCYFRDHEIINSHGRPLISSFSEILNQTHHFPMNSNTSHRHHQPLINLDQQNQQLVDLPQLDSPSLGIRSSSDNNNYGQTNINNNIGEEYYSDDMESLDHFFASNLTDTSTSGSANFFAHTNFPMNMIPDHNSEASQALGLCFPDSS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00476 317 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Accr2g00476 317 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
Accr2g00476 317 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Accr2g00476 317 FunFam Nac domain-containing protein 86 17 160 - -
Accr2g00476 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 241 - -
Accr2g00476 317 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00476 Accr-Chr2 10650256 10652888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00476 4 236 NAC Transcription Factor Family AT1G71930 65.021 8.63e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g00476 NAM 1.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00476 - - gmx:100811057 380.563