Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00475 ATGACATCACCCCATCACTTTCCTGAGAGATCTTCAATGGGGGATATGGAATCATGTGTGCCACCAGGATTTAGATTCCGTCCAACAGAGGAAGAACTTGTAGGATATTACCTCAAGAGGAAGATTAACTCACTCAAAATCAACCTAGATGTCATTGTTGAGCTAGATCTCTACAAAATTGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAACGAGTGGTATTTTTTCAGCCACAAGGACAAGAAGTATCCGACAGGGACAAGGACGAATAGGGCGACAGCAGCGGGGTTCTGGAAGGCGACAGGGAGGGACAAGGCGGTGATGTCGAAGAACAAGATCATAGGAATGAGGAAGACTCTTGTGTTCTACCAGGGACGTGCCCCTAATGGCAGGAAATCTGACTGGATCATGCATGAATATCGCCTCCAATCTTCTGAACATGCCCCTCCTCAGGCAAAAGGATGGGTTGTGTGTAGAGCATTCATAAAGCCAAGTCCAAGTCATATGAGGCCAGGTTTTGAAGCAGCACAGTGCTATTTCAGAGACCATGAGATCATCAACAGCCATGGAAGGCCCTTGATCTCTTCATTTTCTGAGATTCTGAATCAAACCCATCACTTTCCAATGAATAGCAATACCTCTCATCGTCATCACCAACCTTTGATCAATTTGGATCAGCAGAACCAACAACTAGTTGATCTTCCTCAACTAGATAGCCCTAGTCTGGGAATAAGATCATCATCAGATAATAATAATTATGGCCAAACCAATATTAATAATAATATTGGGGAAGAATATTACAGTGACGACATGGAAAGCTTGGACCATTTTTTTGCTTCAAATCTCACAGATACATCAACTTCTGGTTCTGCTAATTTCTTTGCACACACCAACTTTCCCATGAATATGATACCTGATCATAACAGTGAAGCAAGCCAAGCCCTAGGATTATGCTTTCCTGACTCTTCATAG 990 0.4293 MTSPHHFPERSSMGDMESCVPPGFRFRPTEEELVGYYLKRKINSLKINLDVIVELDLYKIEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNKIIGMRKTLVFYQGRAPNGRKSDWIMHEYRLQSSEHAPPQAKGWVVCRAFIKPSPSHMRPGFEAAQCYFRDHEIINSHGRPLISSFSEILNQTHHFPMNSNTSHRHHQPLINLDQQNQQLVDLPQLDSPSLGIRSSSDNNNYGQTNINNNIGEEYYSDDMESLDHFFASNLTDTSTSGSANFFAHTNFPMNMIPDHNSEASQALGLCFPDSS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00475 329 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 252 - -
Accr2g00475 329 SUPERFAMILY NAC domain 11 169 IPR036093 GO:0003677|GO:0006355
Accr2g00475 329 FunFam Nac domain-containing protein 86 29 172 - -
Accr2g00475 329 Pfam No apical meristem (NAM) protein 21 148 IPR003441 GO:0003677|GO:0006355
Accr2g00475 329 Gene3D NAC domain 29 172 IPR036093 GO:0003677|GO:0006355
Accr2g00475 329 ProSiteProfiles NAC domain profile. 20 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00475 Accr-Chr2 10649036 10652888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00475 16 248 NAC Transcription Factor Family AT1G71930 65.021 1.09e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g00475 NAM 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00475 - - gmx:100811057 388.267