Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00467 ATGAAGAAGAATAGCGTTCCTTCAAAATCTTCTTTAGCAAAATCCTTTTCGGTCTTGCCGCATCAAACCCAAAGACTCAGAGATCATTTCCTTCTGGGCAAGAAGCTAGGTCAAGGCCAATTTGGTACGACATATCTCTGCACCGAGAAATCCACAGGGAAGCAATTTGCGTGCAAATCGATCCCTAAGCGAAAGCTATTGTGCAAAGAAGATTACGAGGATGTATGGAGGGAGATTCAGATTATGCATCATTTGTCGGAGCACCCTAATGTTGTTCAAATACAAGGAACATACGAGGATACTGTATTCGTACACTTAGTTATGGAGCTTTGCGCTGGCGGTGAGCTTTTTGATAGGATCATTCTGAAGGGGAATTATAGTGAGAAAGAGGCGGTTAAGTTGATAGCCACCATTGTTGGCGTTGTGGAAGCTTGTCACTCTCTTGGGGTCATGCATAGAGATCTCAAACCTGAGAATTTCTTGTTTGAAAGTCAAGATGAAGATGCCAAGATGAAGGCTACGGATTTTGGGTTGTCTGCGTTCTACAAGCCAGGACAATACTGTTCTGATATGGTTGGGAGTCCCTATTATGTTGCTCCAGAGGTGTTGTGCAAGCATTATGGACCAGAAGCGGATGTATGGAGTGTTGGTATTATCTTATACATCTTACTGAGTGGGGTCCCACCGTTTTGGGCAGAAACTGAGGCAGGAATTTTCAGACAGATTTTACATGGAGAGCTAGATCTTGTGTCGGAACCATGGCCAAGCATCTCAGAAAGTGCTAAAGATTTGGTAAAACAGATGCTTGAGAGGGATCCCAGGAAAAGAATCTCTGCACATAAAGTTTTATGTCATCCTTGGATCGTCGATGATACAGTTGCCCCTGACAAGCCTCTAGACTCTGCAGTTTTGACACGGCTGAAGCAGTTCTCAGAAATGAATAAACTTAAGAAGATGGCACGACGTGTCATAGCAGAAAGACTTTCAGAAGAGGAAATTGGTGGTTTAAGAGAGTTGTTCAAAATGATTGACACAGACAACAGTGGAACAATAACATTTGAGGAACTCAAAGAAGGTCTCAAGAAAGTTGGTTCTAATCTGATGGAAGCTGAAATCAAATCCCTTATGGAAGCGGCCGATATAGACAACAATGGAACAATAGATTATGGTGAATTTCTTGCTGCTACACTGCACTTAAATAAGATGGAAAGAGAGGATAATTTGGTTGCAGCCTTTTCCTATTTTGACAAAGATGGTAGTGGTTACATCACCCTTGATGAGCTTCAACAGGCTTGTAAAGAGTTTGGCTTAGTTGATGTACATCTGGATGAAACAATCAAAGAGATTGATCTAGACAATGATGGGAGAATTGATTTTGCAGAGTTCTCGGCGATGATGAAGAAAAGCGATGGCGGTGTTGGGGTTGGAGTTGGATCGAGCAGAACCTTGAGAGGCAATTTAAACTTCAATATAGCAGATGCCTTTGGAGGTCAAGACTCATCCTGA 1506 0.4236 MKKNSVPSKSSLAKSFSVLPHQTQRLRDHFLLGKKLGQGQFGTTYLCTEKSTGKQFACKSIPKRKLLCKEDYEDVWREIQIMHHLSEHPNVVQIQGTYEDTVFVHLVMELCAGGELFDRIILKGNYSEKEAVKLIATIVGVVEACHSLGVMHRDLKPENFLFESQDEDAKMKATDFGLSAFYKPGQYCSDMVGSPYYVAPEVLCKHYGPEADVWSVGIILYILLSGVPPFWAETEAGIFRQILHGELDLVSEPWPSISESAKDLVKQMLERDPRKRISAHKVLCHPWIVDDTVAPDKPLDSAVLTRLKQFSEMNKLKKMARRVIAERLSEEEIGGLRELFKMIDTDNSGTITFEELKEGLKKVGSNLMEAEIKSLMEAADIDNNGTIDYGEFLAATLHLNKMEREDNLVAAFSYFDKDGSGYITLDELQQACKEFGLVDVHLDETIKEIDLDNDGRIDFAEFSAMMKKSDGGVGVGVGSSRTLRGNLNFNIADAFGGQDSS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00467 501 SUPERFAMILY Protein kinase-like (PK-like) 26 298 IPR011009 -
Accr2g00467 501 Gene3D Phosphorylase Kinase; domain 1 31 115 - -
Accr2g00467 501 CDD STKc_CAMK 29 287 - -
Accr2g00467 501 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 459 - -
Accr2g00467 501 SMART serkin_6 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00467 501 FunFam Calcium-dependent protein kinase 1 32 115 - -
Accr2g00467 501 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Accr2g00467 501 Pfam EF-hand domain pair 408 467 IPR002048 GO:0005509
Accr2g00467 501 Pfam EF-hand domain pair 336 396 IPR002048 GO:0005509
Accr2g00467 501 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Accr2g00467 501 FunFam Calcium-dependent protein kinase SK5 116 300 - -
Accr2g00467 501 ProSitePatterns EF-hand calcium-binding domain. 380 392 IPR018247 -
Accr2g00467 501 Pfam Protein kinase domain 33 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00467 501 ProSiteProfiles Protein kinase domain profile. 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00467 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Accr2g00467 501 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Accr2g00467 501 SUPERFAMILY EF-hand 327 467 IPR011992 -
Accr2g00467 501 ProSiteProfiles EF-hand calcium-binding domain profile. 441 472 IPR002048 GO:0005509
Accr2g00467 501 Gene3D Transferase(Phosphotransferase) domain 1 116 299 - -
Accr2g00467 501 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Accr2g00467 501 FunFam Calcium-dependent protein kinase 1 296 470 - -
Accr2g00467 501 Gene3D - 300 470 - -
Accr2g00467 501 SMART efh_1 371 399 IPR002048 GO:0005509
Accr2g00467 501 SMART efh_1 407 435 IPR002048 GO:0005509
Accr2g00467 501 SMART efh_1 335 363 IPR002048 GO:0005509
Accr2g00467 501 SMART efh_1 441 469 IPR002048 GO:0005509
Accr2g00467 501 ProSitePatterns EF-hand calcium-binding domain. 344 356 IPR018247 -
Accr2g00467 501 ProSiteProfiles EF-hand calcium-binding domain profile. 331 366 IPR002048 GO:0005509
Accr2g00467 501 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00467 Accr-Chr2 10510573 10515219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00467 15 496 EF-hand Containing Proteins AT1G35670 80.913 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr2g00467 Pkinase 9.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00467 K13412 - qsa:O6P43_008002 832.017