Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00459 ATGGGGAGGATGAATCTTCTTGTGTTTTTATTCTTATGTGTGACGGCTTCATGCTATATGGCAGTGGCCAAGGTGGTGCTGATTGGGAACAACGTCACTCTATCCTTCGACGATATTGAAGCTAATTTTGCTCCAGCGATGAAAGGTTCTGGAGAATGTGGGGTCTTGTATATAGCAGAGCCGGTTGATGCATGTACAGAACTGATAAATAAAGTTGAACCGCTTTCAAATACAAGTTCACCTTTTGTTTTGATAATTAGAGGGGGCTGTAGCTTTGAAGAGAAAGTCAGAAGAGCACAGAAGGCTGGCTTTAAAGCTGCAATTGTCTATGACGATGAAGATGATGGCATCTTAGTTTCAATGGCAGGAAATTCAGGCGGTATAAAAATACATGCAGTATTTGTAACTAAAGCCTCAGGTGAAATACTGAAAGGATATGCTGGACTGACTAACATTGAAGTGTGGCTAATTCCAAGTTTTGAAAACTCAGCATGGTCTATCATGGCAATTTCATTCATTTCCCTACTAGCAATGTCAGCAGTTTTGGCTACTTGTTTCTTTGTCCGGAGGCATCGCATTCGGAGAGAAAGGCCTCAGTCTTCTCGTGTTCGTGAGTTTCATGGGATGAGTAGTCGCTTGGTGAAAGCAATGCCTAGTTTGATATTTACTGCTGTTTTGGAGGATAATTGCACCTCAATGACATGTGCAATATGCCTTGAAGACTATTGTGTTGGAGAGAAGCTCAGGATTCTGCCCTGCTGTCACAAGTTTCATGCTGCTTGTGTGGATGCTTGGCTCACTTCATGGAGAACCTTTTGTCCAGTTTGTAAGCGTGATGCAAGGACTGGTCTACCTGATCCTCCACCTTCAGAATCAACGCCTTTGCTTTCATCTGGCGCAGCATCTGCAGCATCCTCTGTAGCGTCATCTCTGAGATCATCATTCGCATCATCTGCTGCAATACAAATTGGCCGGGCATCGTCACAGTCCCCATTTGTTTCTCGGGACCATTCGGTGGCTAGTACTCCCTACATTCAGCCATCATATAGTTCCGTTCGCCATTCTCCTTTCATGAGTGTCAGTCGAAGCTCAGTAGATCTAAGGAACGCATCCCAAAGATCTCAAGCTTCTCATTTGAATTCTCCACATTCTATGATTTACCCATCAATGTCATCAATGAACTCAAGGTACTTGTCTCCACATATTCGTAGCCCGAGCAATGTTTCAGCAAGTTATCTTGGTTCTTCTAGTCATCATCAACACCCACTTCGTTATAGCGAGTCAGCTGCGAGTTTTTCTCCATTTGCTTCCGCCCAGTCCCTTCCAGAATGCTGA 1335 0.4404 MGRMNLLVFLFLCVTASCYMAVAKVVLIGNNVTLSFDDIEANFAPAMKGSGECGVLYIAEPVDACTELINKVEPLSNTSSPFVLIIRGGCSFEEKVRRAQKAGFKAAIVYDDEDDGILVSMAGNSGGIKIHAVFVTKASGEILKGYAGLTNIEVWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPQSSRVREFHGMSSRLVKAMPSLIFTAVLEDNCTSMTCAICLEDYCVGEKLRILPCCHKFHAACVDAWLTSWRTFCPVCKRDARTGLPDPPPSESTPLLSSGAASAASSVASSLRSSFASSAAIQIGRASSQSPFVSRDHSVASTPYIQPSYSSVRHSPFMSVSRSSVDLRNASQRSQASHLNSPHSMIYPSMSSMNSRYLSPHIRSPSNVSASYLGSSSHHQHPLRYSESAASFSPFASAQSLPEC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00459 444 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 195 282 IPR013083 -
Accr2g00459 444 CDD PA_C_RZF_like 9 164 IPR044744 -
Accr2g00459 444 ProSiteProfiles Zinc finger RING-type profile. 235 277 IPR001841 -
Accr2g00459 444 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 23 157 - -
Accr2g00459 444 Pfam PA domain 82 143 IPR003137 -
Accr2g00459 444 SUPERFAMILY RING/U-box 228 289 - -
Accr2g00459 444 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 159 292 - -
Accr2g00459 444 Gene3D - 17 156 - -
Accr2g00459 444 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Accr2g00459 444 Pfam Ring finger domain 234 277 IPR001841 -
Accr2g00459 444 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 195 282 - -
Accr2g00459 444 MobiDBLite consensus disorder prediction 363 385 - -
Accr2g00459 444 SMART ring_2 235 276 IPR001841 -
Accr2g00459 444 SUPERFAMILY PA domain 81 157 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00459 Accr-Chr2 10365771 10375679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00459 23 443 C3H Transcription Factor Family AT1G22670 47.917 3.78e-115 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00459 K15692 - gmx:100791248 664.84