Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00448 ATGGAAATGGACTACAAAATCAAGACCACTTCACCATCTTCCTCCTCCTCTCCTCCTCCGCCACCGTCATCACAACCACAATCGCCGCCGTCGCCGGTGGTGGTTTCGCCTTGCGCCGCCTGCAAGATCCTCCGCCGTCGCTGCGTCGAGAAGTGTGTTCTGGCTCCGTATTTCCCGCCGACCGATCCGCTCAAGTTCACCATTGCTCACAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGAGCTTCCAGAATCACAGAGAGCAGATGCAGTTAGCAGCATGGTGTATGAAGCAAATGCAAGAATAAGGGACCCAGTATACGGGTGTGCAGGAGCCATTTGTCAGCTTCAGAAGCAAGTGAGCGAGCTGCAAGGTCAGCTAGCCAAGGCTCAAGCCGATCTGGTCAACATGCAGTGTCAGCAAGCCAATTTGGTGGCTCTCATTTGCATGGAAATGAGCCAATGTCACCACCCATTATCTTCAGAGCCCCATCACTCCATGACAGCAGCAGCAGCTCAGCCGCCGGCTCAGCATGAAGACATGAGCTGCTTGTTCGATGACAACAACAACAACATCAACAACTTTGGCTCGGCTTGGGGGCCTTGGGAGCCTCTTTGGACATGA 633 0.5355 MEMDYKIKTTSPSSSSSPPPPPSSQPQSPPSPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQGQLAKAQADLVNMQCQQANLVALICMEMSQCHHPLSSEPHHSMTAAAAQPPAQHEDMSCLFDDNNNNINNFGSAWGPWEPLWT 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00448 210 ProSiteProfiles LOB domain profile. 36 137 IPR004883 -
Accr2g00448 210 Coils Coil 123 143 - -
Accr2g00448 210 MobiDBLite consensus disorder prediction 14 33 - -
Accr2g00448 210 Pfam Lateral organ boundaries (LOB) domain 37 134 IPR004883 -
Accr2g00448 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 36 177 - -
Accr2g00448 210 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00448 Accr-Chr2 10155348 10156937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00448 33 210 AS2 family AT1G07900 63.687 3.66e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr2g00448 LOB 4.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00448 - - gmx:100806667 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g00448 2 10155348 10156937 Accr2g00448 2 10155348 10156937 ECH