Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00443 ATGGGGAGGAAAGGGAGTTGGTTTTCTTCAGTGAGGAAAGTTCTCCTTCCTCGTTCCAAGAAAGATCAGGACAAAAAGCTAAAGTCAAATGAAGTAGGTTATGACAATCAAAAGGGCTTGGAAGCAGCTTTGGCAAATGAAGGAGCAAAATTTGCTGTTCCTCCTGCTTTTCCATCCATAGAAGATATTAAATTAAATGGAACAGAGAATGAGCAGAGCAAGTACGCTTATTCTCTGGCTCTTGCCACTGCTGCAGCAGCAGAGGCTGCTGTTGCTGCTGCTCAAGCTGCTGCAGCAGTTGTTCGTCTTACTAGTGTGTCCCGTTTCCGTGGAAAGTCGAAGGAAGACATAGCAGCTACCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGCCCTGAAAGGTTTAGTGAGGTTGAAGAGATTGATTCAGGGGAAATCTGTTAAACGACAAGCAGCATCTACTTTACACTGCATGCAGACCTTCACTAGATTGCAGTCTCAGGTCCATGAGAGGCGGACTAGAATGTCAGAGGAGAACCAAGCTCTTCAGTGGCAGCTGCCGCAGAAAAATGTGAAAGAACTTGAGAAGTTGCAAGCTGCTACTGTTGAAGACTGGAATGACACAGCGCAATCAAAGGAGCAAATGGAAGCAAGACAAGCTAAAAGGCAAGATGCTGCGGTTCGAAGAGAGAGAGCTCTGGCCTATGCATTTTCACATCAGCAAAAGTGGAGGAACTCTTCGAAACCTGCAAATCCTACGATATTCATGGATCCAAACAACCCACACTGGGGCTGGAGTTGGCTAGACCGATGGGTAGTAGCACAGCCAGGTCAGGATACGCAAAGTGGCATGGTTCACAGCCAGCATGCATATGCAAATAGCGTGGCAAACCAACCCACGTCTGTTGGAGAAATTACTAAACTTTATACTTCTCGCGGTCCTATTCATCACAATAACAAGCCTTCTCCAGCTGCCCAAAATTCAAGGCGGCCCCCCCCGAGTCACCGGTCTCTTTCAACCCCACCTCAAAAGGTCCCGCCTGTCTCATCTACTTCTACCAAAGTAAGAGCACCAAGCCCAAAGTCATCTTCTTGGGGCCGTGATGATGAGTTGAGGAGTTCAACTAGCTCCCAGTCACAACGGTACCGGAGGCACACTATTTCAGGATCACCATTCAGAGATGACGAGAGCTTCAGAAGCTCATCTGCAATCTCAACTTGCACAGTTCCTACTAAGTCAGCTAAGACCAAATCCAGAATTGAGAATTCATCACTGATTGCTGATAAAAATGGGACATCAGAGAAAGGATCCTCCAATGTGAAGAAGCGATTATCATTCACAAATTCTTCCCCTGCTCGTTTGAGGAATCATTCTGGTCCTCTTAAGGAGGATCTTTTGGCTTCAGCCACTCAAAATAAAGTTGCCAATGGTGGAAGGTAG 1458 0.4643 MGRKGSWFSSVRKVLLPRSKKDQDKKLKSNEVGYDNQKGLEAALANEGAKFAVPPAFPSIEDIKLNGTENEQSKYAYSLALATAAAAEAAVAAAQAAAAVVRLTSVSRFRGKSKEDIAATKIQTAFRGYLARRALRALKGLVRLKRLIQGKSVKRQAASTLHCMQTFTRLQSQVHERRTRMSEENQALQWQLPQKNVKELEKLQAATVEDWNDTAQSKEQMEARQAKRQDAAVRRERALAYAFSHQQKWRNSSKPANPTIFMDPNNPHWGWSWLDRWVVAQPGQDTQSGMVHSQHAYANSVANQPTSVGEITKLYTSRGPIHHNNKPSPAAQNSRRPPPSHRSLSTPPQKVPPVSSTSTKVRAPSPKSSSWGRDDELRSSTSSQSQRYRRHTISGSPFRDDESFRSSSAISTCTVPTKSAKTKSRIENSSLIADKNGTSEKGSSNVKKRLSFTNSSPARLRNHSGPLKEDLLASATQNKVANGGR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00443 485 SMART iq_5 114 136 IPR000048 GO:0005515
Accr2g00443 485 MobiDBLite consensus disorder prediction 347 366 - -
Accr2g00443 485 Gene3D iswi atpase 112 151 - -
Accr2g00443 485 MobiDBLite consensus disorder prediction 399 461 - -
Accr2g00443 485 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Accr2g00443 485 MobiDBLite consensus disorder prediction 375 392 - -
Accr2g00443 485 MobiDBLite consensus disorder prediction 317 340 - -
Accr2g00443 485 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Accr2g00443 485 MobiDBLite consensus disorder prediction 317 485 - -
Accr2g00443 485 PANTHER IQ-DOMAIN 5-RELATED 1 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00443 Accr-Chr2 10104739 10107689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00443 1 468 IQD Protein Family AT5G03040 41.684 8.08e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00443 - - tcc:18586349 481.87