Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00442 ATGGGGAGGAAAGGGAGTTGGTTTTCTTCAGTGAGGAAAGTTCTCCTTCCTCGTTCCAAGAAAGATCAGGACAAAAAGCTAAAGTCAAATGAAGTAGGTTATGACAATCAAAAGGGCTTGGAAGCAGCTTTGGCAAATGAAGGAGCAAAATTTGCTGTTCCTCCTGCTTTTCCATCCATAGAAGATATTAAATTAAATGGAACAGAGAATGAGCAGAGCAAGTACGCTTATTCTCTGGCTCTTGCCACTGCTGCAGCAGCAGAGGCTGCTGTTGCTGCTGCTCAAGCTGCTGCAGCAGTTGTTCGTCTTACTAGTGTGTCCCGTTTCCGTGGAAAGTCGAAGGAAGACATAGCAGCTACCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGCCCTGAAAGGTTTAGTGAGGTTGAAGAGATTGATTCAGGGGAAATCTGTTAAACGACAAGCAGCATCTACTTTACACTGCATGCAGACCTTCACTAGATTGCAGTCTCAGGTCCATGAGAGGCGGACTAGAATGTCAGAGGAGAACCAAGCTCTTCAGTGGCAGCTGCCGCAGAAAAATGTGAAAGAACTTGAGAAGTTGCAAGCTGCTCAGACTGTTGAAGACTGGAATGACACAGCGCAATCAAAGGAGCAAATGGAAGCAAGACAAGCTAAAAGGCAAGATGCTGCGGTTCGAAGAGAGAGAGCTCTGGCCTATGCATTTTCACATCAGCAAAAGTGGAGGAACTCTTCGAAACCTGCAAATCCTACGATATTCATGGATCCAAACAACCCACACTGGGGCTGGAGTTGGCTAGACCGATGGGTAGTAGCACAGCCAGGTCAGGATACGCAAAGTGGCATGGTTCACAGCCAGCATGCATATGCAAATAGCGTGGCAAACCAACCCACGTCTGTTGGAGAAATTACTAAACTTTATACTTCTCGCGGTCCTATTCATCACAATAACAAGCCTTCTCCAGCTGCCCAAAATTCAAGGCGGCCCCCCCCGAGTCACCGGTCTCTTTCAACCCCACCTCAAAAGGTCCCGCCTGTCTCATCTACTTCTACCAAAGTAAGAGCACCAAGCCCAAAGTCATCTTCTTGGGGCCGTGATGATGAGTTGAGGAGTTCAACTAGCTCCCAGTCACAACGGTACCGGAGGCACACTATTTCAGGATCACCATTCAGAGATGACGAGAGCTTCAGAAGCTCATCTGCAATCTCAACTTGCACAGTTCCTACTAAGTCAGCTAAGACCAAATCCAGAATTGAGAATTCATCACTGATTGCTGATAAAAATGGGACATCAGAGAAAGGATCCTCCAATGTGAAGAAGCGATTATCATTCACAAATTCTTCCCCTGCTCGTTTGAGGAATCATTCTGGTCCTCTTAAGGAGGATCTTTTGGCTTCAGCCACTCAAAATAAAGTTGCCAATGGTGGAAGGTAG 1461 0.4648 MGRKGSWFSSVRKVLLPRSKKDQDKKLKSNEVGYDNQKGLEAALANEGAKFAVPPAFPSIEDIKLNGTENEQSKYAYSLALATAAAAEAAVAAAQAAAAVVRLTSVSRFRGKSKEDIAATKIQTAFRGYLARRALRALKGLVRLKRLIQGKSVKRQAASTLHCMQTFTRLQSQVHERRTRMSEENQALQWQLPQKNVKELEKLQAAQTVEDWNDTAQSKEQMEARQAKRQDAAVRRERALAYAFSHQQKWRNSSKPANPTIFMDPNNPHWGWSWLDRWVVAQPGQDTQSGMVHSQHAYANSVANQPTSVGEITKLYTSRGPIHHNNKPSPAAQNSRRPPPSHRSLSTPPQKVPPVSSTSTKVRAPSPKSSSWGRDDELRSSTSSQSQRYRRHTISGSPFRDDESFRSSSAISTCTVPTKSAKTKSRIENSSLIADKNGTSEKGSSNVKKRLSFTNSSPARLRNHSGPLKEDLLASATQNKVANGGR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00442 486 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Accr2g00442 486 MobiDBLite consensus disorder prediction 376 393 - -
Accr2g00442 486 SMART iq_5 114 136 IPR000048 GO:0005515
Accr2g00442 486 MobiDBLite consensus disorder prediction 318 341 - -
Accr2g00442 486 MobiDBLite consensus disorder prediction 318 486 - -
Accr2g00442 486 MobiDBLite consensus disorder prediction 348 367 - -
Accr2g00442 486 Gene3D iswi atpase 112 151 - -
Accr2g00442 486 PANTHER IQ-DOMAIN 5-RELATED 1 467 - -
Accr2g00442 486 MobiDBLite consensus disorder prediction 400 462 - -
Accr2g00442 486 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00442 Accr-Chr2 10104739 10107689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00442 1 469 IQD Protein Family AT5G03040 41.597 1.32e-96 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00442 - - tcc:18586349 478.018