Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00422 ATGGGTTGTTTTCAATTATTTATTGTTTTACTTATATCAATTTCTGTTGAAATTTGTTTCGCCATCTCCCCGATCGAAGATCAAGAGAGAGATAAGATAATCCATTTACCGGGGCAACCCAAAAATGTAGGATTTGCTCAGTACTCTGGTTATGTAACTGTGAATGAACAAGCTGGGAGGGCATTATTTTATTGGTTGATCGAATCGCCTGAAAGTCGTGGACCCCAGTCCAGGCCACTTGTTTTATGGCTCAATGGTGGTCCTGGATGCTCCTCTATTGCTTACGGTGCAGCTGAAGAGATTGGCCCTTTTCGAATTAATTCTGATGGGAACTCACTTTACATGAATCCATATGCTTGGAACAATTTGGCAAATATACTTTTCCTTGAGTCTCCTGCTGGGGTGGGTTTTTCATATTCCAATGAAACATCAGATCTGAACACGGCAGGTGACCAGAGAACAGCTGAAGATTCCTATACATTTCTTGTTAATTGGTTTGAGAGGTTTCCTCAGTATAAGTATAGAGATTTTTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCACAGTTGGCTCAACTTGTTTACCACAAAAATAAGGGGGTGCAGAAACCAATTATAAATCTAAAGGGATTTATGGTTGGAAACGCTGTTACTGATGATTACAACGATTATGTTGGCACATTTGAGTACTGGTGGACCCATGGTATGATTTCGGATTCCTCATATAAGATGCTGCAAATTGCCTGTGACTTTGGGTCATCCCAACATCCATCAATTCAATGCATGGAGGCTCTAAGAGTTGCAGATTTAGAGCAGGGAAACATTGACCCATATAGCATTTATACCCGGCCATGCAATAATACTGCATCGCTCAGGCGCAGCTTGGGCGGTCGCTATCCATGGATGTCTCGAGCTTATGACCCTTGTACTGAGAGGTATTCAACCTTGTACTTCAATCATCCGGAGGTTCAGAAGGCACTCCATGCCAATGTAACTAATATCCCATATTCATGGCAAACATGCAGTGACACTGTTGCAAACTACTGGACCGATTCTCCACTATCTATGCTTCCAATATATCGAGAACTCATTGGTGCTGGTCTCAAGATATGGGTGTACAGTGGAGATACTGACTCCGTGGTTCCAATAACTGCAACTCGATATTCCATTGATGCCTTGAAATTTCCCTCCATCACCAATTGGTACCCTTGGTATGATGATGGCAAGGTTGGTGGATGGAGCCAAGTTTATGAAGGCCTTACATTGGTTACAGTAAGAGGAGCTGGACATGAAGTTCCACTACATCGACCTCGCCAATCATTCATTCTTTTCAGGTCATTCTTGGAGAACAAGCCCATGCCAAGCATACAACAATAA 1383 0.4237 MGCFQLFIVLLISISVEICFAISPIEDQERDKIIHLPGQPKNVGFAQYSGYVTVNEQAGRALFYWLIESPESRGPQSRPLVLWLNGGPGCSSIAYGAAEEIGPFRINSDGNSLYMNPYAWNNLANILFLESPAGVGFSYSNETSDLNTAGDQRTAEDSYTFLVNWFERFPQYKYRDFYIAGESYAGHYVPQLAQLVYHKNKGVQKPIINLKGFMVGNAVTDDYNDYVGTFEYWWTHGMISDSSYKMLQIACDFGSSQHPSIQCMEALRVADLEQGNIDPYSIYTRPCNNTASLRRSLGGRYPWMSRAYDPCTERYSTLYFNHPEVQKALHANVTNIPYSWQTCSDTVANYWTDSPLSMLPIYRELIGAGLKIWVYSGDTDSVVPITATRYSIDALKFPSITNWYPWYDDGKVGGWSQVYEGLTLVTVRGAGHEVPLHRPRQSFILFRSFLENKPMPSIQQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00422 460 FunFam Carboxypeptidase 358 452 - -
Accr2g00422 460 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Accr2g00422 460 FunFam Carboxypeptidase 27 289 - -
Accr2g00422 460 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Accr2g00422 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Accr2g00422 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Accr2g00422 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Accr2g00422 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Accr2g00422 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Accr2g00422 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 439 IPR001563 GO:0004185|GO:0006508
Accr2g00422 460 SUPERFAMILY alpha/beta-Hydrolases 28 456 IPR029058 -
Accr2g00422 460 FunFam Carboxypeptidase 308 455 - -
Accr2g00422 460 Gene3D - 358 451 - -
Accr2g00422 460 Gene3D - 311 348 - -
Accr2g00422 460 Gene3D alpha/beta hydrolase 25 297 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00422 Accr-Chr2 9864716 9870913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00422 321 455 Calmodulin-binding Proteins AT2G22960 29.412 6.22e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00422 K16297 - gmx:100805722 815.453