Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00413 ATGGCTTCTAGCACATTGATGAGCTATGGCATTGCCACTGCCTCCTCTTTCCCTTCCCGCCTTTCTTCCTCTAAATCCAGATTCGTCGCCGCTATCCCACTCCCCGGCGTCGCCTCGTCTTCTCGCTTCACTATGACCGCCGACTGGATGCCCGGCCAGCCCCGACCTCCTTACCTCGACGGTTCAGCACCCGGCGACTTCGGATTCGACCCTCTTCGTCTTGGGGAAGTGCCGGAGAATCTTGAGAGATACAAAGAATCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTGCCAGGGATATTGGTACCAGAGGCATTGGGATTAGGGAACTGGGTTGAAGCACAGAGATGGGCAGCAGTTCCAGGGGGACAAGCAACATACCTAGGGAACCCAGTTCCATGGGGCACCCTCCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTGGAGCACCAACGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGTGGTGCCTTCGACCCTCTTGGCTACTCCAAAGACCCTGTCAAGTTCGAAGAATACAAAGTCAAAGAAATAAAAAATGGGCGTTTGGCGCTGTTGGCATTTGTGGGGATATGTGTGCAGCAATCAGCATACCCAGGAACAGGGCCATTGGAGAACCTGGCAACTCACTTGGCTGATCCATGGCACAAAAACATTGGGGATATCATCATTCCCAGATCTCTTTATCCTTGA 738 0.5271 MASSTLMSYGIATASSFPSRLSSSKSRFVAAIPLPGVASSSRFTMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVEAQRWAAVPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHKNIGDIIIPRSLYP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00413 245 FunFam Chlorophyll a-b binding protein, chloroplastic 50 236 - -
Accr2g00413 245 Pfam Chlorophyll A-B binding protein 56 210 IPR022796 -
Accr2g00413 245 Gene3D Chlorophyll a/b binding protein domain 50 236 - -
Accr2g00413 245 SUPERFAMILY Chlorophyll a-b binding protein 40 239 - -
Accr2g00413 245 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 32 237 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00413 Accr-Chr2 9736945 9738300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00413 1 197 Chloroplast and Mitochondria Gene Families AT3G54890 81.818 5.97e-110 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00413 K08907 - cave:132187255 454.521