Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00381 ATGGGAAATGTTGAAATTCCCAATTGGCTAAAAGACTTGCCATTGGCTCCGGAATTTCGCCCAACTGATACCGAATTCGCCGACCCAATTGCTTACATTTCAAAGATTGAGAAAGAAGCTAGTGCTTTTGGGATATGTAAGATTATCCCTCCTTTACCCAAGCCTTCTAAAAGATATGTCTTCTCTAATTTAAACAAGTCTCTTTTGAAGAGCCCGGAATTGGCTTCAGATAGTAATTCGGTTGGAGTTAGTAATTCTTTGAAAATTATTTCTGGCGATGGTGGTAGCGATGGGGAGGCTCGGGCTGTGTTTACCACAAGGCATCAAGAATTGGGGCAGGGTATTAAAAGAACCAAAGGAACAATTCAAAGCCCACTTTCAGGTGTTCATAAACAAGTATGGCAGAGTGGGGAAGTTTATACACTTGAACAGTTTGAGTCTAAATCAAAGGCTTTTGCAAGAAGTGTACTAGGCATGGTTAAGGAGGTTTCTCCGCTGGTTATAGAGGCTATGTTTTGGAAGGCAGCTTCAGAGAAGCCTATATATGTGGAGTACGCCAATGATATGCCTGGTTCTGCTTTTGGGGAATCCAAGGGTCAATTTCATTACATTCATAGAAGGAGAAGGAAAAAGGCTTATTATCAAAGGAGTCTAGATACTTCAGATTGCCAAGAACCCAAAATGGATGAAATAGAAGATACCCAGACTGGAGAAAGTAAGGATGCCTCTGCCCATAATCATGCAGACTTATGCTTACGGTCATCAAATTCAACTTCAAAACCATCAACATTTTCGTCAAATGAAGCCCCACTTTCTATTAGGCAGAAGAGCTCAGATTCCAGTGACGACATGGAAGGTACTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAATTTACAAGTCATTGCACGTTCACAGGGCTCGCTAACACGTTTCATGCCAGATGATATTCCTGGTGTCACTTCCCCCATGGTATATATTGGTATGCTGTTCAGTTGGTTTGCCTGGCATGTAGAGGATCATGAACTTCATAGCATGAATTTTCTTCACATTGGTTCTTCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTCTGCTTTCGAGGAACTCATCCGCACGGAGGTTGGTGGTGGTAATATTGATCACTTAGCTGCTCTGACTCTGTTGGGGGAGAAGACAACCCTTCTATCACCAGAGGCAGTCGTTGCATCTGGGATCCCTTGTTGCAGGTTGACGCAGAACCCTGGAGAATTTGTTGTGACCTTTCCAAGGGCTTATCATGTAGGATTCAGCCATGGCTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACGATGGCTCACAGTAGCCAAGGAAGCTGCAGTGCGTAGGGCTGCAATGAATTATCTTCCCATGCTTTCCCATCAGCAACTGCTTTACCTATTGACTATGTCTTTTGTTTCAAGGGTGCCAAGAACATTGTTACCAGGTGTGCGGAGTTCCCGTCTAAGAGACCGTCAAAAAGAAGAAAGAGAATTGTTAGTAAAAAGATCTTTTATAGAAGATATGCAGCAAGAAAACAAATTGCTATCCATTCTTCTTGGAAAGCAATCAACTTATCATGCTGTTTTATGGAATGCTGATTTACTCCCAGATTCGAGCAAGGATTCTCCTCAGTTGCCTGACTTAACTTCTACAACTAGAACCTCTATGGAAGACATGTCAAATTTGAGTTCTGCTGATAAGAGCAACCACAGTTGTCTGTTTGATGAAATGAGCTTCTATATGGAGAATCTGACTGAATTTTATATTGGTGATGACAGTCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGCATGTGTGGGTTGTGGAATTCTTGGTTTTCCTTTCATGGCTGTGGTACAACCATCAGAGAGATCAGCAATGGAATTTCAGCCAGTCTCAGGGAATGCTCTTTCTGTTACTGATCGTCCTTCAACAAATGAACCATCGAAACTACCATTAATGAACTGTGATAAGGGTTGGAACACCTCTTGCAAATTTTTGAGGCCACGAATTTTCTGCCTGGAGCATGCTGTTCAGATTATGGAGATGCTGCATTGTAAAGGTGGAGCTAGTGTGCTTGTAATTTGCCATTCAGACTACCAGAAGATCAAGGCACATTCCAGGGCAGTAGCAGATGAGATAGGCTGTGCTTTTCATTATAATGAGGTTCCATTAGAGACTGCATCCCCTGAAGATTTGACCTTGATAGATCTTGCGATTGATGGTGAAGAACACAATGAATGTGAAGAAGACTGGACGTCTGAATTAGGAATTAACCTGCGGTATTGTGTCAAGGCAAGAAAGAACTCTGCATATGAACAAGCTCCTTTCAAATTGACACTGGGAATGTTGTTCCCTGAGAAATTTCCTGATTCAGATGTCTTGTCTGTAAATTGGCTGTCAAAGAGATTTCGCTCCAGAAGGTTGAATTTAGCTCAGGCGAAAGCATGTCAGAGAAAGAAGGATGATCGGTCAGAAGGAAAGACAGATGGCTCCCCTGCTAAAAAGATGCTTCAGTATTCAAGGAGAAAGTTCAGGTCAAAGCAAGGTTGTTTCTCTGGATCAAACATGGTTCATGTATCTCATAAAGAGTCCATTGATGTGCCAGCTGTCTTGAGTGGAGATTTTGGCATCCAGACTCCTGAAAATAAGCCTAACACTGAGAATTCTACGAGTGTTGTGAAACCTTCAGATTTCACTCTGGAACCTAGGTCAGTGGATGAAAATGCTGGACCACAGTTCCAGAATCAAACTACAGTGGAATTAAAGATAGATGGCCAAAGTAGTTGCACAACACCTGATCATTCTATGTTGCCCTGTAATATGGGTGCCTCAGAAATTGGTAATGAAGACAATGAGATTTTGCATGACAAGATAAATTCTAGCTCACTTACTGTTGTTAAAGACAAAAATATTGACATGCTTAGTCAGAACCTTATAACTGAAGAAATTAACACCAATTGTAGCAATAGCCTGTATTCCAATGAAGCACATCAAGAATTTGAACCTACCCACAAGAGTAATAGGTTGGAAGCTACTTCATCTCCCGTTTCATCAGTAACTCAGCAGACACTTGCCTCCACGGAAGAAAATTCTGATAGTGCTAGAAAGGATCGTATCACTGAAAGCATGAGCTATGGTGCTTCCTTAAAAAAGACAACAGACACTTCTTGCATGAATGTAAACAACATGGAACCTACTGTAAGTTGTGATAGATCAATAAATATGCCGATGTCAAAGATTGACGCTCATGAAGTTCCAAAAGAGCTTTGTGCCTCTGCAGATTCCAGCCCTCAATCTACTTCAGATGTGAGAAACGAACCGGAAATCCATCCAAATAGCATGAATGATGAGGAAATCTGCTCTGGTTTAGGTGCTATGCCATCGTTAAAGGACTCTTCTATGCCAATCCGGGAGTGTTCTACAACTGAGGGAGAGGAATATGCAAGAGATAGCTTAAATGGAAGCAAAGTTCATTCTTCGCATGACTATAGGGAGCTGCCAAGCTCTGAAAGGAAACAGAAGAAAAGAAACAGGGAATTGGAACAGATACAAGAGGCCAATACAAGTTTCCAAGGCTTTGTTAGAAGTCCATGTGAAGGGTTGAGACCGAGGGCTTGCAAAGAAGCCTCTGACCGGGGCATGGCTGAAACCAGCAATTCTGTGGAGGAAAATCAAGAGGTCAAAAGGGCTAGGAGGACATCATCAGATGTTGTGGTGTCTAGCAAGAATAAGAAGAATGCTGTTAAGAGGTCTCACAAGTGTGACCTTGATGGTTGCCATATGAGTTTTACGACCAAGGCAGATTTGATGTTTCACAAGCGCAACCGTTGTCCTCATGATGGGTGTGGAAAGAAATTCAGGTCCCACAAATATGCTGTGCTTCACCAGCGTGTCCATGATGATGACAGGCCTCTCAAGTGCCCATGGGAAGGTTGCTCGATGTCCTTCAAGTGGGCATGGGCTAGGACCGAGCATATACGGGTGCATACCGGGGAAAAGCCATACCACTGCAAGGTTGAGGGATGTGGCCTTTCGTTCAGATTTGTATCTGATTATAGCAGGCACAGGCGAAAAACCGGGCACTATGTAAAGTCAGTTGATTGA 4143 0.4277 MGNVEIPNWLKDLPLAPEFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKRYVFSNLNKSLLKSPELASDSNSVGVSNSLKIISGDGGSDGEARAVFTTRHQELGQGIKRTKGTIQSPLSGVHKQVWQSGEVYTLEQFESKSKAFARSVLGMVKEVSPLVIEAMFWKAASEKPIYVEYANDMPGSAFGESKGQFHYIHRRRRKKAYYQRSLDTSDCQEPKMDEIEDTQTGESKDASAHNHADLCLRSSNSTSKPSTFSSNEAPLSIRQKSSDSSDDMEGTAGWKLSNSPWNLQVIARSQGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHIGSSKTWYAVPGDYASAFEELIRTEVGGGNIDHLAALTLLGEKTTLLSPEAVVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPRWLTVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRTLLPGVRSSRLRDRQKEERELLVKRSFIEDMQQENKLLSILLGKQSTYHAVLWNADLLPDSSKDSPQLPDLTSTTRTSMEDMSNLSSADKSNHSCLFDEMSFYMENLTEFYIGDDSLPCHFQTDSGALACVGCGILGFPFMAVVQPSERSAMEFQPVSGNALSVTDRPSTNEPSKLPLMNCDKGWNTSCKFLRPRIFCLEHAVQIMEMLHCKGGASVLVICHSDYQKIKAHSRAVADEIGCAFHYNEVPLETASPEDLTLIDLAIDGEEHNECEEDWTSELGINLRYCVKARKNSAYEQAPFKLTLGMLFPEKFPDSDVLSVNWLSKRFRSRRLNLAQAKACQRKKDDRSEGKTDGSPAKKMLQYSRRKFRSKQGCFSGSNMVHVSHKESIDVPAVLSGDFGIQTPENKPNTENSTSVVKPSDFTLEPRSVDENAGPQFQNQTTVELKIDGQSSCTTPDHSMLPCNMGASEIGNEDNEILHDKINSSSLTVVKDKNIDMLSQNLITEEINTNCSNSLYSNEAHQEFEPTHKSNRLEATSSPVSSVTQQTLASTEENSDSARKDRITESMSYGASLKKTTDTSCMNVNNMEPTVSCDRSINMPMSKIDAHEVPKELCASADSSPQSTSDVRNEPEIHPNSMNDEEICSGLGAMPSLKDSSMPIRECSTTEGEEYARDSLNGSKVHSSHDYRELPSSERKQKKRNRELEQIQEANTSFQGFVRSPCEGLRPRACKEASDRGMAETSNSVEENQEVKRARRTSSDVVVSSKNKKNAVKRSHKCDLDGCHMSFTTKADLMFHKRNRCPHDGCGKKFRSHKYAVLHQRVHDDDRPLKCPWEGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDYSRHRRKTGHYVKSVD 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00381 1380 MobiDBLite consensus disorder prediction 1222 1257 - -
Accr2g00381 1380 ProSiteProfiles Zinc finger C2H2 type domain profile. 1348 1374 IPR013087 -
Accr2g00381 1380 ProSitePatterns Zinc finger C2H2 type domain signature. 1320 1342 IPR013087 -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 1155 1191 - -
Accr2g00381 1380 FunFam Probable lysine-specific demethylase ELF6 1315 1344 - -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 215 291 - -
Accr2g00381 1380 Pfam JmjC domain, hydroxylase 324 443 IPR003347 -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 827 849 - -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 551 577 - -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 827 843 - -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 552 577 - -
Accr2g00381 1380 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 1105 1121 - -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 1008 1054 - -
Accr2g00381 1380 ProSitePatterns Zinc finger C2H2 type domain signature. 1290 1312 IPR013087 -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 249 291 - -
Accr2g00381 1380 SMART cupin_9 291 460 IPR003347 -
Accr2g00381 1380 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1314 - -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 1103 1191 - -
Accr2g00381 1380 SMART JmjN_1 15 55 IPR003349 -
Accr2g00381 1380 SMART c2h2final6 1265 1287 IPR013087 -
Accr2g00381 1380 SMART c2h2final6 1318 1342 IPR013087 -
Accr2g00381 1380 SMART c2h2final6 1288 1312 IPR013087 -
Accr2g00381 1380 SMART c2h2final6 1348 1374 IPR013087 -
Accr2g00381 1380 ProSitePatterns Zinc finger C2H2 type domain signature. 1350 1374 IPR013087 -
Accr2g00381 1380 SUPERFAMILY Clavaminate synthase-like 279 457 - -
Accr2g00381 1380 SUPERFAMILY beta-beta-alpha zinc fingers 1288 1325 IPR036236 -
Accr2g00381 1380 ProSiteProfiles Zinc finger C2H2 type domain profile. 1318 1347 IPR013087 -
Accr2g00381 1380 Gene3D Cupin 9 464 - -
Accr2g00381 1380 ProSiteProfiles JmjC domain profile. 291 460 IPR003347 -
Accr2g00381 1380 SUPERFAMILY beta-beta-alpha zinc fingers 1328 1371 IPR036236 -
Accr2g00381 1380 Gene3D Classic Zinc Finger 1286 1372 - -
Accr2g00381 1380 Pfam jmjN domain 17 50 IPR003349 -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 222 247 - -
Accr2g00381 1380 MobiDBLite consensus disorder prediction 1020 1042 - -
Accr2g00381 1380 ProSiteProfiles Zinc finger C2H2 type domain profile. 1288 1317 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00381 Accr-Chr2 8870218 8884366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00381 1 856 C2H2 Transcription Factor Family AT5G04240 57.973 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g00381 JmjC 4e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00381 - - adu:107467970 1526.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g00381 2 8870218 8884366 Accr2g00381 2 8870218 8884366 ECH