Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00372 ATGAATAACTCTGTCTCAGATAACAGTTTTTACATTGAAAGCGATGAAGAAGATGAGGAAAAGGAGCTTAACAAAGGAGAAGCTGATGCTGATGGGAACGATTCAGATTCTTCAAATTTTTCAAATGACAACCAGCAGGCAAACAAACTCAGTTCGCATAGCATCGCATGGCCTCAGAGTTACAGGCAGTCAATGGATCTATACAGTAGTGTACCATCACCAAGTATCGGATTTCTGGGCACTCCCTCACTGTCCAGATTAAGTAGCTCCTTTCTTTCTTCATCTCTAACAAGAAGGCACACTCCTGAAACCATCCCTTCTGCAAAACCTCTGTTACAACCTACAGCTGATGAGGCACAGAGACGAAGCTCTCATGCCTTGCTTCCTCCCATTCCTTCTAGGAGATCTATGCTTAAGAAGGATTCTGTCAAGGTTTCTCATGAAGTCCCAATTCCTCGCCACTGCTCTTATGGACAAGCTGTAGTTAATGGCATAAATGTCCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCCAAACAAGGTGGATGGCTTGGGCTTTCCATTTTATTAATTTTTGCGATTCTTTCCTTTTATACTGGGATCCTTTTGCGTGCCTGCTTGGATAGTGAACCTGGGTTAGAAACGTACCCTGATGTTGGCCAAGCTGCTTTTGGAACTACAGGACGTATTGCCATCTCTGTAATATTATACGCGGAACTGTATGCTTGTTGCATAGAGTACATAATTCTGGAGAGCGATAACTTGTCTTCATTGTTTCCAAATGCGCACTTAAGTTTGGGTGGCATTGAATTGGATTCACATGTTCTATTTGCACTGTTGACCACCTTGGCTGTTCTTCCAACTGTTTGGCTCCGTGACCTAAGTATTCTCAGTTACATCTCAGCTGGAGGAGTTATTGCATCAGTTTTGGTGTCTCTCTGCTTGTTGTGGATTGGGCTGGTAGATGGAGTTGGCTTTGAGCACAAAGGGACACCATTGAATCTTGCAACCCTCCCTGTTGCTTTGGGTGTCTATGGTTACTGCTATTCAGGACATGCAGTGTTCCCAAATATCTATACATCAATGGCAAATCGAAATCAATTCCCTGCAGTGCTATTGGCATGCTTTGGTATTTGCACCGCATTGTATGCCGGGGTGGCTGTTATGGGGTACACAATGTTTGGTGATGCTACTCTTTCTCAGTTCACTCTTAACTTGCCTCCAGATTTAGTGGCCACAAAGGTTGCTGTCTGGACAACGGTGGTCAATCCATTCACCAAATATGCATTGACTATATCTCCAATAGCAATGAGTTTGGAGGAGTTGATACCGTCAACCAACGCTAAGTCTTATCTATATTCCATCCTCATAAGAACAGGACTGGTAATTTCTACGCTCGTTGTTGGTCTTTCAGTTCCCTTCTTTGGCCTGGTGATGTCGTTGATTGGATCGTTACTCACAATGCTCGTTACCTTGATTCTTCCCTGTGCTTGTTTCCTGAGGATCTTGCGTGGCAAAGCCTCAAGCCTTCAGGCAACACTTTGCATTGCAGTTATCACAGTAGGAGCAGCATCATCGGTCTATGGAACCTACTCTGCCCTTTCCAAGATTATAGAAAGCTTGAACCAATGA 1638 0.4396 MNNSVSDNSFYIESDEEDEEKELNKGEADADGNDSDSSNFSNDNQQANKLSSHSIAWPQSYRQSMDLYSSVPSPSIGFLGTPSLSRLSSSFLSSSLTRRHTPETIPSAKPLLQPTADEAQRRSSHALLPPIPSRRSMLKKDSVKVSHEVPIPRHCSYGQAVVNGINVLCGVGILSTPYAAKQGGWLGLSILLIFAILSFYTGILLRACLDSEPGLETYPDVGQAAFGTTGRIAISVILYAELYACCIEYIILESDNLSSLFPNAHLSLGGIELDSHVLFALLTTLAVLPTVWLRDLSILSYISAGGVIASVLVSLCLLWIGLVDGVGFEHKGTPLNLATLPVALGVYGYCYSGHAVFPNIYTSMANRNQFPAVLLACFGICTALYAGVAVMGYTMFGDATLSQFTLNLPPDLVATKVAVWTTVVNPFTKYALTISPIAMSLEELIPSTNAKSYLYSILIRTGLVISTLVVGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGKASSLQATLCIAVITVGAASSVYGTYSALSKIIESLNQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00372 545 FunFam Amino acid transporter AVT1A 153 542 - -
Accr2g00372 545 PANTHER OS05G0424000 PROTEIN-RELATED 164 525 - -
Accr2g00372 545 MobiDBLite consensus disorder prediction 1 52 - -
Accr2g00372 545 MobiDBLite consensus disorder prediction 33 52 - -
Accr2g00372 545 Pfam Transmembrane amino acid transporter protein 156 534 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00372 Accr-Chr2 8788388 8796026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00372 1 478 Amino Acid or Auxin Permease AAAP Family AT2G39130 71.605 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00372 K15015 - gmx:100775840 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g00372 2 8788388 8796026 Accr2g00372 2 8788388 8796026 ECH