Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00371 ATGATGAATAACTCTGTCTCAGATAACAGTTTTTACATTGAAAGCGATGAAGAAGATGAGGAAAAGGAGCTTAACAAAGGAGAAGCTGATGCTGATGGGAACGATTCAGATTCTTCAAATTTTTCAAATGACAACCAGCAGGCAAACAAACTCAGTTCGCATAGCATCGCATGGCCTCAGAGTTACAGGCAGTCAATGGATCTATACAGTAGTGTACCATCACCAAGTATCGGATTTCTGGGCACTCCCTCACTGTCCAGATTAAGTAGCTCCTTTCTTTCTTCATCTCTAACAAGAAGGCACACTCCTGAAACCATCCCTTCTGCAAAACCTCTGTTACAACCTACAGCTGATGAGGCACAGAGACGAAGCTCTCATGCCTTGCTTCCTCCCATTCCTTCTAGGAGATCTATGCTTAAGAAGGATTCTGTCAAGGTTTCTCATGAAGTCCCAATTCCTCGCCACTGCTCTTATGGACAAGCTGTAGTTAATGGCATAAATGTCCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCCAAACAAGGTGGATGGCTTGGGCTTTCCATTTTATTAATTTTTGCGATTCTTTCCTTTTATACTGGGATCCTTTTGCGTGCCTGCTTGGATAGTGAACCTGGGTTAGAAACGTACCCTGATGTTGGCCAAGCTGCTTTTGGAACTACAGGACGTATTGCCATCTCTGTAATATTATACGCGGAACTGTATGCTTGTTGCATAGAGTACATAATTCTGGAGAGCGATAACTTGTCTTCATTGTTTCCAAATGCGCACTTAAGTTTGGGTGGCATTGAATTGGATTCACATGTTCTATTTGCACTGTTGACCACCTTGGCTGTTCTTCCAACTGTTTGGCTCCGTGACCTAAGTATTCTCAGTTACATCTCAGCTGGAGGAGTTATTGCATCAGTTTTGGTGTCTCTCTGCTTGTTGTGGATTGGGCTGGTAGATGGAGTTGGCTTTGAGCACAAAGGGACACCATTGAATCTTGCAACCCTCCCTGTTGCTTTGGGTGTCTATGGTTACTGCTATTCAGGACATGCAGTGTTCCCAAATATCTATACATCAATGGCAAATCGAAATCAATTCCCTGCAGTGCTATTGGCATGCTTTGGTATTTGCACCGCATTGTATGCCGGGGTGGCTGTTATGGGGTACACAATGTTTGGTGATGCTACTCTTTCTCAGTTCACTCTTAACTTGCCTCCAGATTTAGTGGCCACAAAGGTTGCTGTCTGGACAACGGTGGTCAATCCATTCACCAAATATGCATTGACTATATCTCCAATAGCAATGAGTTTGGAGGAGTTGATACCGTCAACCAACGCTAAGTCTTATCTATATTCCATCCTCATAAGAACAGGACTGGTAATTTCTACGCTCGTTGTTGGTCTTTCAGTTCCCTTCTTTGGCCTGGTGATGTCGTTGATTGGATCGTTACTCACAATGCTCGTTACCTTGATTCTTCCCTGTGCTTGTTTCCTGAGGATCTTGCGTGGCAAAGCCTCAAGCCTTCAGGCAACACTTTGCATTGCAGTTATCACAGTAGGAGCAGCATCATCGGTCTATGGAACCTACTCTGCCCTTTCCAAGATTATAGAAAGCTTGAACCAATGA 1641 0.4394 MMNNSVSDNSFYIESDEEDEEKELNKGEADADGNDSDSSNFSNDNQQANKLSSHSIAWPQSYRQSMDLYSSVPSPSIGFLGTPSLSRLSSSFLSSSLTRRHTPETIPSAKPLLQPTADEAQRRSSHALLPPIPSRRSMLKKDSVKVSHEVPIPRHCSYGQAVVNGINVLCGVGILSTPYAAKQGGWLGLSILLIFAILSFYTGILLRACLDSEPGLETYPDVGQAAFGTTGRIAISVILYAELYACCIEYIILESDNLSSLFPNAHLSLGGIELDSHVLFALLTTLAVLPTVWLRDLSILSYISAGGVIASVLVSLCLLWIGLVDGVGFEHKGTPLNLATLPVALGVYGYCYSGHAVFPNIYTSMANRNQFPAVLLACFGICTALYAGVAVMGYTMFGDATLSQFTLNLPPDLVATKVAVWTTVVNPFTKYALTISPIAMSLEELIPSTNAKSYLYSILIRTGLVISTLVVGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGKASSLQATLCIAVITVGAASSVYGTYSALSKIIESLNQ 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00371 546 PANTHER OS05G0424000 PROTEIN-RELATED 165 526 - -
Accr2g00371 546 MobiDBLite consensus disorder prediction 1 53 - -
Accr2g00371 546 MobiDBLite consensus disorder prediction 34 53 - -
Accr2g00371 546 FunFam Amino acid transporter AVT1A 154 543 - -
Accr2g00371 546 Pfam Transmembrane amino acid transporter protein 157 535 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00371 Accr-Chr2 8788385 8796026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00371 2 479 Amino Acid or Auxin Permease AAAP Family AT2G39130 71.605 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00371 K15015 - gmx:100775840 810.446