Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00329 ATGGAAACACCAGAAGAAGTCATCTCTTTGGAGACTAAAGACCAAACCCACCAGATTGTCAGGGGCAAAAGAACCAAAAGGGTAAGGCCACAATCTCCATTACCCCTCACCGCCACCGTGGCCAAAACCGAAGAATTATACCAATTTGTCGGTGATGATGATAATACCAAATACTTTGCCGCCCCAACAACGACTTCTTCAGCAGAATTTGAAGAAAATAGCAACATTAATCATTACAGCAGCAGCACAGAGGAAGAGGAAGACATGGCCAATTGCTTGATTCTTCTGGCTCAAGGCCAATCTCGGTTTTCTCCGAAACCCGCCAAGGAAGAAGGTAACATGATGATGATAACAATGAAGACTAACAACGACAACAATTATAACCATAACAGCAGCAGCAAGAGATTCATGGAAGCATCCACCATGGGAGCTAACAGAGCAGGTTTTTATGTCTATGAATGTAAGACCTGCAATAAAACCTTCCCTTCTTTCCAAGCTTTAGGAGGCCACAGAGCAAGCCATAAGAAGCTTAAGAACTTATCGCCAATTTCTGCCATTTTAGACAAAGAGAAGAAAAAAGATCAAGACTTTACCATCTGTAGTCCTACCCCACTTTCTTTTCAGTCTCTGAACAGTGGCAGCAATCTTAACAATAAGAATAAGGTTCATGAGTGTTCGGTCTGTGGGGCTGAATTTGCTTCAGGTCAGGCTTTAGGTGGCCACATGAGAAGGCACAGAGCACCCAATGGAACAACCGCCACAACTGCGAACAATGCATTCTTGGCACTTAACAACAATCGGGTGGGTTTGGGTTTGGAAGCTGATCAATATGACAATGAAGATCATCACCACCCCAGAAAGAAAAGGAACATTTTGTCTTTGGACTTAGATCTTAATCTTCCTGCCCCAGAAGCTGATCATCAGAGTGAGTCATCATCTTTTGCCTTTGAACCCAAGAAGCAACCGCAGCAAGCAAGTTTGGTTTTTTCTTCTGCACATGCTTTGGTGGATTGTCATTACTGA 1023 0.434 METPEEVISLETKDQTHQIVRGKRTKRVRPQSPLPLTATVAKTEELYQFVGDDDNTKYFAAPTTTSSAEFEENSNINHYSSSTEEEEDMANCLILLAQGQSRFSPKPAKEEGNMMMITMKTNNDNNYNHNSSSKRFMEASTMGANRAGFYVYECKTCNKTFPSFQALGGHRASHKKLKNLSPISAILDKEKKKDQDFTICSPTPLSFQSLNSGSNLNNKNKVHECSVCGAEFASGQALGGHMRRHRAPNGTTATTANNAFLALNNNRVGLGLEADQYDNEDHHHPRKKRNILSLDLDLNLPAPEADHQSESSSFAFEPKKQPQQASLVFSSAHALVDCHY 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00329 340 ProSitePatterns Zinc finger C2H2 type domain signature. 154 174 IPR013087 -
Accr2g00329 340 Gene3D Classic Zinc Finger 150 245 - -
Accr2g00329 340 SMART c2h2final6 223 245 IPR013087 -
Accr2g00329 340 SMART c2h2final6 152 174 IPR013087 -
Accr2g00329 340 ProSiteProfiles Zinc finger C2H2 type domain profile. 223 250 IPR013087 -
Accr2g00329 340 PANTHER ZINC FINGER PROTEIN ZAT5 73 322 - -
Accr2g00329 340 ProSiteProfiles Zinc finger C2H2 type domain profile. 152 179 IPR013087 -
Accr2g00329 340 Pfam C2H2-type zinc finger 151 176 - -
Accr2g00329 340 Pfam C2H2-type zinc finger 222 248 - -
Accr2g00329 340 ProSitePatterns Zinc finger C2H2 type domain signature. 225 245 IPR013087 -
Accr2g00329 340 SUPERFAMILY beta-beta-alpha zinc fingers 151 245 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00329 Accr-Chr2 7751563 7752585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00329 1 340 C2H2 Transcription Factor Family AT5G04390 40.885 5.19e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g00329 zf-C2H2_6 5.9e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00329 - - pcin:129295754 417.927