Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00325 ATGGGTCGCGAGACTTTACCAGTTCCAGCTCCACCTGCCCCAGTAGTCACAGCACCGAATCCAACATCACCACCAGTAGTAGCACCCCAAGCTCCTCCTACATCACTTGCTCCTGGCTTTCGTTTTCACCCAACTGATGAGGAGCTCGTTATTTACTACCTTAAGCGCAAAGTTCGTGGAAAAACTTTCCGATTTGATGCAATCTCTGAGGTCGACATTTACAGAAGCGAACCTTGGGACCTAGCAGATAAGTCGAGGCTAAAGACAAGAGACCAAGAATGGTATTTTTTTAGTGCTTTGGATAAGAAATACGGTAATGGCGGGAGAATGAACAGGGCTACGAGCAAAGGGTACTGGAAAGCCACTGGGAATGACCGTCCAGTGAGGCATGAACAAAGGACCGTAGGGCTGAAGAAAACTTTGGTGTTTCATAGTGGAAGGGCTCCAGATGGTAAGCGTACAAACTGGGTAATGCATGAGTACAGGCTTGTTGAAGAAGAACTGGAAAGAGCCGAAATCGGGTCGGCCCAGGATGCATACGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGTCAACGTTATGCACCTTTCATTGAGGAAGAATGGGATGATTCATCAGCACTGATTCCTGGGGTAGAGCCTGTAAATGAAGCTACAGCTGTCCGTCGCCCACTCATTGAAGGCAATGGCCATGTTGGCTGTTTTGAAAGAACTGATGCTGTCCAGGATACTCACTCCATCAACAAAGTTCCTCTTGATGTGAACAAGCTACCAATCGAAACTCAAAATCTTCTAGCTGTCTGCAAGAGGGAGAGCATGGCTGAGTTTCCGTCACCTGAAAGGGATAATTGTAAGTCTATGGATGACTACCCATCACCACAAACAGACAATCCGAAGCCATTCTCGCTAATATACAAAAGAAGGCGACATAGCTTGAACTCGAGTCATTCAAATGTGCCAGAGCATTCGGTTCGCAACGGCCAGGATCCATGCTCATCAATAATAACCACTGCTGCAACTACACTCCCAACCACAACCACCACTACAACTTCTAGCACTTCGGCGAGAAAACATTTTCTGTCTGCACTTGTGGAGTTTTCCCTACTTGAATCTCTTGAACCTAAGGAAAGTCCTTCGACCCAGGTGCCAAAATTCGACCCCTCCTCTCTTGACTCGCCTTTGCCCCCAAGCTGCCTGAAGTTCATCCAGCAGTTGCAGGACGAGGTACACAAGCTCTCGGTGGAAAGGGAGACAATGAAGTTCGAGATGATGAGCGCGCAGGCCATGATAAACATTCTGCAATCGCGTATCGACATGCTGATCAAAGAGAACAAGGAGTTGAAGAGAGGCGCCGAGGATGACGCTTAG 1383 0.4743 MGRETLPVPAPPAPVVTAPNPTSPPVVAPQAPPTSLAPGFRFHPTDEELVIYYLKRKVRGKTFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVEEELERAEIGSAQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDSSALIPGVEPVNEATAVRRPLIEGNGHVGCFERTDAVQDTHSINKVPLDVNKLPIETQNLLAVCKRESMAEFPSPERDNCKSMDDYPSPQTDNPKPFSLIYKRRRHSLNSSHSNVPEHSVRNGQDPCSSIITTAATTLPTTTTTTTSSTSARKHFLSALVEFSLLESLEPKESPSTQVPKFDPSSLDSPLPPSCLKFIQQLQDEVHKLSVERETMKFEMMSAQAMINILQSRIDMLIKENKELKRGAEDDA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00325 460 Coils Coil 435 455 - -
Accr2g00325 460 MobiDBLite consensus disorder prediction 7 32 - -
Accr2g00325 460 Pfam No apical meristem (NAM) protein 38 163 IPR003441 GO:0003677|GO:0006355
Accr2g00325 460 Coils Coil 407 427 - -
Accr2g00325 460 ProSiteProfiles NAC domain profile. 36 188 IPR003441 GO:0003677|GO:0006355
Accr2g00325 460 MobiDBLite consensus disorder prediction 1 32 - -
Accr2g00325 460 FunFam Nac domain-containing protein 86 45 191 - -
Accr2g00325 460 SUPERFAMILY NAC domain 31 189 IPR036093 GO:0003677|GO:0006355
Accr2g00325 460 Gene3D NAC domain 45 191 IPR036093 GO:0003677|GO:0006355
Accr2g00325 460 MobiDBLite consensus disorder prediction 281 306 - -
Accr2g00325 460 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 35 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00325 Accr-Chr2 7683192 7690670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00325 1 454 NAC Transcription Factor Family AT3G10480 44.689 1.49e-118 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g00325 NAM 3.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00325 - - pcin:129312892 799.66