Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00324 ATGGGTCGTGATTCTGCGACTTCTCTCGCCCCCGGATTCCGATTCCACCCCACCGACGAAGAACTCGTTAGCTACTACCTCAAGCGCAAGGTGCGTGGCAAAACCTTCCTGTGCGACGCAATTGCCGTCATCGACATCTATAAATCCGAACCCTGGGACCTCCCGTGTCAGTCGAAGCTGAAAAGTAGGGACTTGGAATGGTACTTCTTCAGTGGGCTGGACAAGAAGTACGGGAATGGATCGAAGACAAATCGAGCTACGGAGAAAGGATACTGGAAGACTACGGGGAAGGATCGCCCTGTGCGACACAAGTCGCGAATTGTCGGAATGAAGAAGACCCTTGTTTATCATGATGGTCGAGCACCGCGCGGTGCCCGTACCAATTGGGTGATGCATGAGTACAGAATGACCGATGATGAATTGGTGAAAGCAGGAATAGCTCAGGATGCTTTTGTGCTCTGTAGGGTTTTCCAGAAGAGCGGTACTGGGCCAAAGAATGGGGAGCAGTACGGTGCCCCCTTTATAGAGGAGGAATGGGAAGAGGACGAGGTGGCTCCAGTGTCAGCTGAACGGGCTATTACGGATGTAGTTTTAATGGGTGATGATGTAGGTTTTCTTGAAACGAACGACCTTGAGCAGCACCTTGGTACGGACATAGCATCTTCTAGTGCTGCTATTCCTCTCAGCATTTGTTATGGGGAGAGTAGCAGCTATCCTGAACCTGAGCATTCCCAGGAAACCACTGAAGAACAGAAGCCTTTGGCAATCACTGGTGGAACTTGTGAGCCCCAAGAGGATCGGTTTCTGAATATACCTGAGCAGTATGCAGTGGATGGTAAAACATTGAAGGATGAATACGAAGCAGAAGCAACGCATGATGGAAGTCCTCTTAACGTCGATAATGTGTTTGATGATCCGTGCTGGGATGCTATTGATTTTCCTCAGATTGGTGATGGTTCATTCCTGGAAACCAATGACCTTTTAAATCCCATTGAGGCAGACCTTGATGTTAACGACATGCTGGATGAGTATCTTAACTACATTGGTACGGACATAGCATCTTCTAGTGCTGCTATTCCTCTCAGCATTTGTTATGGGGAGAGTAGCAGCTATCCTGAACCTCAGCATTGCCGGGAAACCACTGAAGAACAGAGGCCTTTGGCAATCACTGGTGGAACTTGTGAGCCCCAAGAGGATTGGTTTCTGAATATACCTGAGCAGTATGCAGTGGATGGTAAAACATTGAAGGATGAATACGAAGCGGAAGCAACGCACGATGGAAGTCCTCTTAACGTCGATAATGTGTTTGATGATCCGTGCTGGGATGCTATTGATTTTCCTCAGATTGCTGATGGTTCATTCCTGGAAACCAATGACCTTTTAAATCCCATTGAGGCAGACCTTGATGTTAACGACATGCTGGATGAGTATCTTAACTACTTTGATGCTGATGATGATATCTCCAATTTTATATCTTCTGAGGATCCTCAAATAAAGAGCGATGCAGAAGTAATTCCTGACCAAGGACTGCCTTTCACCCAGAATGTGGATGAGGAACCCAACATGGCTTGTGAGCAGAATTTTGATGAAGCACCTTGTAGTGACGGAGCTTCCTCTTCTAAGAAGAATCCAGAATTGTCAAAATCAGTACAAGGAGATATGAATCCATTGACAAAAAGAGTCAGTCGCTTGTTGGACGGCATCCCTGCTCCTCCTGCCTTTGCTTCAGAATTTCCTCCCAAAGACATTGCTCTTCGGCTTCATTCTGCTGCTCAATCTTCCAATCATGTAACTGCAGGTATGATTAGAGTAACTGATATTGCTCTTAGAGGTAACGGGATGGACTGGATGCTGGGCAAGAACGGAGGGTTCGACTTTGTGATCTCTTCTGATTTTTCTCAACCTAATAATATTTCTGATGCGTTGGTCCCGGTTTCTGGTTTGCTGTCTGGCAAGAGTGCCTTTTTGGTGTCACATTGCTGGATTTTCTTGATGCTCTTTTCGGTTCTTATACTTTCACTGAGTTGCAAGATTGGGAGTTGCATGTATGCTGCTGGTAAATGA 2064 0.4646 MGRDSATSLAPGFRFHPTDEELVSYYLKRKVRGKTFLCDAIAVIDIYKSEPWDLPCQSKLKSRDLEWYFFSGLDKKYGNGSKTNRATEKGYWKTTGKDRPVRHKSRIVGMKKTLVYHDGRAPRGARTNWVMHEYRMTDDELVKAGIAQDAFVLCRVFQKSGTGPKNGEQYGAPFIEEEWEEDEVAPVSAERAITDVVLMGDDVGFLETNDLEQHLGTDIASSSAAIPLSICYGESSSYPEPEHSQETTEEQKPLAITGGTCEPQEDRFLNIPEQYAVDGKTLKDEYEAEATHDGSPLNVDNVFDDPCWDAIDFPQIGDGSFLETNDLLNPIEADLDVNDMLDEYLNYIGTDIASSSAAIPLSICYGESSSYPEPQHCRETTEEQRPLAITGGTCEPQEDWFLNIPEQYAVDGKTLKDEYEAEATHDGSPLNVDNVFDDPCWDAIDFPQIADGSFLETNDLLNPIEADLDVNDMLDEYLNYFDADDDISNFISSEDPQIKSDAEVIPDQGLPFTQNVDEEPNMACEQNFDEAPCSDGASSSKKNPELSKSVQGDMNPLTKRVSRLLDGIPAPPAFASEFPPKDIALRLHSAAQSSNHVTAGMIRVTDIALRGNGMDWMLGKNGGFDFVISSDFSQPNNISDALVPVSGLLSGKSAFLVSHCWIFLMLFSVLILSLSCKIGSCMYAAGK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00324 687 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Accr2g00324 687 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Accr2g00324 687 FunFam Nac domain-containing protein 86 18 162 - -
Accr2g00324 687 MobiDBLite consensus disorder prediction 532 553 - -
Accr2g00324 687 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 235 - -
Accr2g00324 687 MobiDBLite consensus disorder prediction 526 553 - -
Accr2g00324 687 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Accr2g00324 687 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00324 Accr-Chr2 7677513 7680772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00324 379 674 NAC Transcription Factor Family AT5G04410 27.010 8.02e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g00324 NAM 5.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00324 - - pcin:129312907 513.072