Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr2g00312 | ATGAACTGTCTTCGGCTTCTTCCCTTTTTCGCTTCCGACTTCAGATCCTCTGGTTTGCCTTTCCAAAGCTTTAGAAGCCACCATAGGAATCCTCTTTGCTCTGCCAATTCATTGGGAATGTCCAATACTAGTGATCCAAATCGAAGTATAGCGGTGAAGTCAGCTTCTGGCTCCATGGCCAGTGCGGGGACGGATAGTGCTGATGTTAAGGAAGAGGAAAAATCTGAGACATATAGTCATAATATGACTGAAGCCATGGGTGCTGTTTTGACTTACAGGCACGAACTAGGGATAAACTACAACTTTATTCGTCCAGACTTAATTGTAGGATCATGCCTGCAGACTCCTGAAGATGTTGACAAGCTTCGTGCAGTAGGAGTGAAAACTATATTTTGCTTGCAACAAGACCCAGATCTAGAATACTTTGGTGTTGATATCAAGGCCATTCAAGAATATGCTGCGTCTTGCAATGACATTCAACACTTGCGGGCTGAGATAAGGGACTTTGATGCATTTGACTTAAGGATGAGGCTTCCGGCTGTAGTTAGCAAATTGTACAAGGCCATAAATCGCAATGGGGGTGTGACATATATACATTGCACTGCTGGACTTGGAAGAGCGCCAGCTGTTGCGTTGGCTTATATGTTTTGGGTTCAGGGTTATAAACTTAATGAGGCTTATAGATTGCTTCTGAGCAAAAGATCATGCTTCCCAAAGTTGGATGCAATAAAAAGTGCAACAGCTGATATTCTTACAGGCTTCAGAAAAAAGCGTGTCACGTTGACATGGGGAGGCAACAATTGCTCCACAGTCGAAATTTCTGGACTTGATATTGGATGGGGCCAGAGAATACCCCTGCAGTATGATGAGAAACAGGGTCTGTGGGTTCTCATGAGGGAATTACCTGTAGGATACTACGAGTACAAGTACATTGTTGATGGGGAATGGATTTGCAATCAGTATGAGCTTGTGGCCTCTCCCAACAAAGATGGCCATGTCAATAATTATCTGCAAGTCATTGACGATGTAGACGTTGCCGATGCCTCCTTAAGGAAGAGGTTGATGGGTGATGATCCTGATCTCACAAAGGATGAACGGCTGAGAACAAGACAGTTTCTTGAAGCTCTTCCTGATGAAGAAGCATGA | 1146 | 0.4398 | MNCLRLLPFFASDFRSSGLPFQSFRSHHRNPLCSANSLGMSNTSDPNRSIAVKSASGSMASAGTDSADVKEEEKSETYSHNMTEAMGAVLTYRHELGINYNFIRPDLIVGSCLQTPEDVDKLRAVGVKTIFCLQQDPDLEYFGVDIKAIQEYAASCNDIQHLRAEIRDFDAFDLRMRLPAVVSKLYKAINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNEAYRLLLSKRSCFPKLDAIKSATADILTGFRKKRVTLTWGGNNCSTVEISGLDIGWGQRIPLQYDEKQGLWVLMRELPVGYYEYKYIVDGEWICNQYELVASPNKDGHVNNYLQVIDDVDVADASLRKRLMGDDPDLTKDERLRTRQFLEALPDEEA | 381 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr2g00312 | 381 | CDD | E_set_AMPKbeta_like_N | 259 | 339 | - | - | |
| Accr2g00312 | 381 | MobiDBLite | consensus disorder prediction | 54 | 78 | - | - | |
| Accr2g00312 | 381 | FunFam | Phosphoglucan phosphatase DSP4, chloroplastic | 92 | 273 | - | - | |
| Accr2g00312 | 381 | FunFam | Phosphoglucan phosphatase DSP4, chloroplastic | 254 | 344 | - | - | |
| Accr2g00312 | 381 | CDD | DSP_laforin-like | 98 | 245 | IPR045204 | GO:0019203 | |
| Accr2g00312 | 381 | Pfam | Dual specificity phosphatase, catalytic domain | 152 | 237 | IPR000340 | GO:0008138|GO:0016311 | |
| Accr2g00312 | 381 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 99 | 256 | IPR020422 | GO:0006470|GO:0008138 | |
| Accr2g00312 | 381 | Pfam | Glycogen recognition site of AMP-activated protein kinase | 259 | 342 | IPR032640 | - | |
| Accr2g00312 | 381 | SMART | dsp_5 | 99 | 249 | IPR020422 | GO:0006470|GO:0008138 | |
| Accr2g00312 | 381 | SUPERFAMILY | E set domains | 257 | 339 | IPR014756 | - | |
| Accr2g00312 | 381 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 96 | 241 | IPR029021 | - | |
| Accr2g00312 | 381 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 176 | 234 | IPR000387 | GO:0016311|GO:0016791 | |
| Accr2g00312 | 381 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 33 | 379 | - | - | |
| Accr2g00312 | 381 | Gene3D | Immunoglobulins | 254 | 344 | IPR013783 | - | |
| Accr2g00312 | 381 | Gene3D | Protein tyrosine phosphatase superfamily | 92 | 372 | IPR029021 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr2g00312 | Accr-Chr2 | 7448931 | 7461922 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr2g00312 | 98 | 381 | Protein tyrosine phosphatase (PTP) family | AT3G52180 | 69.718 | 6.04e-151 | 426 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr2g00312 | - | - | zju:107413253 | 593.193 |