Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00297 ATGGCTACGGAAGACTTCCCTCTCCTCGATTCTCCCTCCCACAATCCCCACTCGCAACCTCTCCTCCACGATCACACGCGCCAATTCCCTTCCTCCACTAGCCCCACCACCGGAGTTGCACCTACCTCCGCCGGTGCCGGCGACTCCTCCAACGCCGACTACTTCTCTCAACCCTTTCCTGACGATGGTGAAGAGTCCTCTGATCCCAACAAATCCTCCTCTGGAGTCTTGACTCCTAGTTCGAAGCGTAACGCTGGCGACAGCTCCTATTATTTTAACAAGAAGTTGAAATCCTCCGCCGCCGGTGGTGGAGGTAGCGTTGCTACGAGCGCTGAACCCGATGTAGGATCCGAAGGGACTTACCGGGTCGATTACCGAAAGGATCGGGAGGAATGGAGCGACACGGCGATCGATTGTCTCCTGGACGCTTACACAGAGAAATTGAACCAGCTGAATCGCGGAAATCTGCGCGGGCGTGATTGGGAGGAGCTGGCGAGAACCGTCAGCGAGCGGTGCTCAGCTGGTAGCGGTGGGGATGGAAAGAACAAATCGCATAAAAGTGTGGAGCAATGCAAGAACAAGATTGATAATTTGAAGAAGAGGTACAAGGTAGAGCTTCAGAGGATAAGTAGTGGCAGCATCACATCCAGTAACTGGCACTGGTTTAAAAAGATCGAAGCTATTGTTGGAAACTCATTGACTGTGAAGACGGCGTCAGATGATGAAAAGGGTGCTGGAGCTAATTCCTTCTCTGCAGCGAGACGTCCAAAGAACAGATATACACCTACCAATGTTGCAGTGTTGAATAACCCAAAAACAAAACCAGCGTCTAATCTCAAATGGCATAGGGTTCTGTTTAAAATCAGTGGAGCTGCATTAGCTGGAAACTGCCAAAGTATTGACCCCAAGGTGGCAATGCAGATTGCTGGGGAAGTGGCAACAGCTTGCCGCCTTGGCATAGAGGTTGCCATTGTTGTCGGTGGTCGTAACTTCTTTTGTGGAGATTCCTGGGTGTCTGCTACTGGGTTGGACAGATCTACGGCTTACCAAATTGGTATGATGGCTACAGTTATGAATTCTATTCTGCTCCATTCTGCTTTGGAGAAGCTGGGTATTCAGACACGTATTCAAAGTGCATTCTCTGTGCCAGAGATTGCTGAACCTTATAACAGGCAACGAGCCATCCGACATCTCGAGAAAGGAAGGGTTGTCATACTTGGTGGTGTCGGTGCTGGCTCCGGAAATCCTCTCTTTACCACTGATACAGCTGCTGCTCTGAGAGCTTCCGAGCTTAATGCAGATGTTGTGCTGAAAGGAACCAATGTCAGTGGGGCCTATGATTGCCATAGTGGCAGTGAGAATGCTACGGTTGATCACATTGCTTTTCGGGAAGTTGCTTCAAGGGGCATCACTTCTGTAGATGTGATGGCATTAGCATACTGTGAAGAGAATGGAATTCCAGTTGTAGTCTTCAACATGCTTGAACCGGGGAATGTTTCAAGGGCTCTATGTGGAGATCAAATTGGTACGTTGATTGATCAGACAGGAAGTGTTAGTTAA 1560 0.4942 MATEDFPLLDSPSHNPHSQPLLHDHTRQFPSSTSPTTGVAPTSAGAGDSSNADYFSQPFPDDGEESSDPNKSSSGVLTPSSKRNAGDSSYYFNKKLKSSAAGGGGSVATSAEPDVGSEGTYRVDYRKDREEWSDTAIDCLLDAYTEKLNQLNRGNLRGRDWEELARTVSERCSAGSGGDGKNKSHKSVEQCKNKIDNLKKRYKVELQRISSGSITSSNWHWFKKIEAIVGNSLTVKTASDDEKGAGANSFSAARRPKNRYTPTNVAVLNNPKTKPASNLKWHRVLFKISGAALAGNCQSIDPKVAMQIAGEVATACRLGIEVAIVVGGRNFFCGDSWVSATGLDRSTAYQIGMMATVMNSILLHSALEKLGIQTRIQSAFSVPEIAEPYNRQRAIRHLEKGRVVILGGVGAGSGNPLFTTDTAAALRASELNADVVLKGTNVSGAYDCHSGSENATVDHIAFREVASRGITSVDVMALAYCEENGIPVVVFNMLEPGNVSRALCGDQIGTLIDQTGSVS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00297 519 Coils Coil 181 208 - -
Accr2g00297 519 Hamap Uridylate kinase [pyrH]. 279 513 IPR015963 GO:0005737|GO:0006221|GO:0033862
Accr2g00297 519 FunFam Aspartate/glutamate/uridylate kinase family protein 132 204 - -
Accr2g00297 519 FunFam Uridylate kinase isoform A 273 518 - -
Accr2g00297 519 MobiDBLite consensus disorder prediction 99 119 - -
Accr2g00297 519 MobiDBLite consensus disorder prediction 1 86 - -
Accr2g00297 519 CDD AAK_UMPK-PyrH-Ec 283 513 IPR015963 GO:0005737|GO:0006221|GO:0033862
Accr2g00297 519 Gene3D - 272 518 IPR036393 -
Accr2g00297 519 MobiDBLite consensus disorder prediction 12 56 - -
Accr2g00297 519 SUPERFAMILY Carbamate kinase-like 280 512 IPR036393 -
Accr2g00297 519 Gene3D - 132 204 - -
Accr2g00297 519 Pfam Amino acid kinase family 283 492 IPR001048 -
Accr2g00297 519 MobiDBLite consensus disorder prediction 69 86 - -
Accr2g00297 519 Pfam Myb/SANT-like DNA-binding domain 129 228 IPR044822 -
Accr2g00297 519 PANTHER URIDYLATE KINASE 125 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00297 Accr-Chr2 7207974 7210709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00297 132 239 Trihelix Transcription Factor Family AT3G14180 38.889 2.05e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr2g00297 AA_kinase 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00297 - - qsa:O6P43_004948 796.964