Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00256 ATGTTTTGCTTGACTCAGTTCCTGTCTGGATTTCCCCTGGGCTTCCAAAAAGAATGGCATGCTGTTGCATCATGGACTTGGGATGCTCAGGATGAAACATGTGGGATTTGTAGGATGGCCTTTGATGGCTGTTGCCCAGACTGTAAACATCCTGGGGATGACTGCCCTCTGATTTGGGGTGCATGCAATCATGCTTTTCATTTGCACTGTATTCTGAAATGGGTGAATTCGCAGACTTCACAAGCTCATTGCCCAATGTGCCGTCGGGAATGGCAGTTTAAAGAATGA 288 0.4688 MFCLTQFLSGFPLGFQKEWHAVASWTWDAQDETCGICRMAFDGCCPDCKHPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00256 95 PANTHER RING BOX 17 95 - -
Accr2g00256 95 CDD RING-H2_APC11 31 93 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Accr2g00256 95 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 95 IPR013083 -
Accr2g00256 95 SUPERFAMILY RING/U-box 17 94 - -
Accr2g00256 95 ProSiteProfiles Zinc finger RING-type profile. 45 88 IPR001841 -
Accr2g00256 95 FunFam Anaphase-promoting complex subunit 11 14 95 - -
Accr2g00256 95 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 17 95 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00256 Accr-Chr2 6649514 6651026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00256 45 88 C3H Transcription Factor Family AT1G72220 41.304 2.80e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00256 K03358 - fve:101315159 197.593