Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g00255 | ATGAAAGTTAAGTTCCTGTCTGGATTTCCCCTGGGCTTCCAAAAAGAATGGCATGCTGTTGCATCATGGACTTGGGATGCTCAGGATGAAACATGTGGGATTTGTAGGATGGCCTTTGATGGCTGTTGCCCAGACTGTAAACATCCTGGGGATGACTGCCCTCTGATTTGGGGTGCATGCAATCATGCTTTTCATTTGCACTGTATTCTGAAATGGGTGAATTCGCAGACTTCACAAGCTCATTGCCCAATGTGCCGTCGGGAATGGCAGTTTAAAGAATGA | 282 | 0.4645 | MKVKFLSGFPLGFQKEWHAVASWTWDAQDETCGICRMAFDGCCPDCKHPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE | 93 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g00255 | 93 | ProSiteProfiles | Zinc finger RING-type profile. | 43 | 86 | IPR001841 | - | |
Accr2g00255 | 93 | CDD | RING-H2_APC11 | 29 | 91 | IPR024991 | GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602 | |
Accr2g00255 | 93 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 12 | 93 | IPR013083 | - | |
Accr2g00255 | 93 | Pfam | Anaphase-promoting complex subunit 11 RING-H2 finger | 15 | 93 | IPR024991 | GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602 | |
Accr2g00255 | 93 | SUPERFAMILY | RING/U-box | 15 | 92 | - | - | |
Accr2g00255 | 93 | PANTHER | RING BOX | 15 | 93 | - | - | |
Accr2g00255 | 93 | FunFam | Anaphase-promoting complex subunit 11 | 11 | 93 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g00255 | Accr-Chr2 | 6648922 | 6651026 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g00255 | 43 | 86 | C3H Transcription Factor Family | AT1G72220 | 41.304 | 2.20e-06 | 42.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g00255 | K03358 | - | fve:101315159 | 195.282 |