Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00254 ATGGACGTTCTATCGATTTCGCCTGCTTTAAATGAACCCATGTCTTTTTACATTCTCAAACCTCATAGAATCCAACTTCGCCACCTTCGCTTAAATCCCAGATTGCGCAATTCATCAAATTACACAACCCAGTTCAAGCTTTCTTCTTCTTCTTCTTCTTCCTGTTTCTGTTCTAGAATAGCGGCAACTTCAGTAACTACTTTCACTCCCTTAGCTTCTTCCTCCACTGAGAATCGCCATTGGATAGTGATAATGGAAAAGCCTCCACTAGGGGTTGATTCCAAGCAGCAAGTCATCGATTATTTTGTTCAAACTCTGCAAAGAGTCATTGGCAGTGAGAAAGAGGCTCAAATGTCTATTTACGATGCTTCGTGGGATACTCACTACGGTTTTTGTTGTGACATCGATGAAGTAACTTCTTCCCAGCTCGCTCGTTTACCTGGGGTCATTTCGGTCAAGCCTGATCCAGATTTCTGCTCTCCAGAAAAGGATTATAGGTCATCAAATGGGCATGGAGATAATTTGGCAAAGCTACAAACTGGAGCCACTTTGTTGTTCCCTGCTGGGAATTCAAAGCATTGGCTTGTTCGAATGGATAAACCAGGGGTTGGGGTTGTTACAAAGGCCCAAGTTGTGGATTTTTATGCTCAAATTCTAACCAAAGTCATGGGAAATGAGAAGGACGCACAAATGTGTATATACCATGTTTCTTGGAAAAACAACTTTGGATTTTGTTGTGAACTTGATGAGGATTGTGCACGAGAGTTAGCTGGCGTCCCTGGTGTCTTATCAGTTCAGCCAGATAATAATTTTGAGTCAGAAATTAAAGATTATGCAGGTGTAAACTTAGGAAACAGTTTGAATGCGATGAACTCTGAAGCAAGTGAGGCAACTCCTTTGAAAACAAAAAAGCTTTTTGTGACAGGCCTATCATTCTACACATCTGAGAAAACTTTACGTGCTGCATTTGAAGGCTTTGGTGAGATTGTTGAAGTTAAAGTTATTATGGATAAAATTTCTAAGAGGTCCAAGGGTTATGCATTTGTGGAATACACAACAGAGGAGGCTGCAGCTGCAGCATTGAAGGAGATGAATGGAAAGATTATCAATGGCTGGATGATAGTTGTGGATGTTGCCAAGCCTAGCCCGCCAAAATTTAATAGGGGCCGTGCCAGACCTGTAGCCTGA 1188 0.4175 MDVLSISPALNEPMSFYILKPHRIQLRHLRLNPRLRNSSNYTTQFKLSSSSSSSCFCSRIAATSVTTFTPLASSSTENRHWIVIMEKPPLGVDSKQQVIDYFVQTLQRVIGSEKEAQMSIYDASWDTHYGFCCDIDEVTSSQLARLPGVISVKPDPDFCSPEKDYRSSNGHGDNLAKLQTGATLLFPAGNSKHWLVRMDKPGVGVVTKAQVVDFYAQILTKVMGNEKDAQMCIYHVSWKNNFGFCCELDEDCARELAGVPGVLSVQPDNNFESEIKDYAGVNLGNSLNAMNSEASEATPLKTKKLFVTGLSFYTSEKTLRAAFEGFGEIVEVKVIMDKISKRSKGYAFVEYTTEEAAAAALKEMNGKIINGWMIVVDVAKPSPPKFNRGRARPVA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00254 395 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 187 272 IPR037045 -
Accr2g00254 395 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 63 158 IPR037045 -
Accr2g00254 395 Gene3D - 285 394 IPR012677 -
Accr2g00254 395 SUPERFAMILY RNA-binding domain, RBD 293 391 IPR035979 GO:0003676
Accr2g00254 395 SMART rrm1_1 304 377 IPR000504 GO:0003723
Accr2g00254 395 FunFam Organelle RRM domain-containing protein 1, chloroplastic 182 271 - -
Accr2g00254 395 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 303 381 IPR000504 GO:0003723
Accr2g00254 395 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 305 371 IPR000504 GO:0003723
Accr2g00254 395 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 183 372 IPR039206 GO:0016554
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00254 Accr-Chr2 6642339 6645783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00254 300 394 C2H2 Transcription Factor Family AT2G19380 36.082 1.56e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00254 - - qsa:O6P43_004903 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g00254 2 6642339 6645783 Accr2g00254 2 6642339 6645783 ECH