Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00241 ATGTCAAAAGAGGTTGTGAAAGATGATTACATCACCAATGAATACAAAAGAAATGAATCATTCAATACAAGGAAGGCCAATATCATGAAAAAAGTAAGTGAACTTGGCATCCTTTGCGGTGTTGAGGCTGGAGCAATCATTTTCAATGGTGATCCTTCTGATCCTACACCAGAGGTTTGGCCGCACCATGAAGGTGTGAAGCAACTGATCGAGAGGTGCCATGATAGGCCTGTCCCACGAAGGACCTTGACCATAGAGGAATCAATACAACAAAGGATCAACATAGCAAAAGAACTTCTAACAAGAAAACGGCAAGAAAATGATGTAGAAGAGATTTCCCAACAAATGATCCAATGTTTAGCGGGGAAAGCAATGCCCAACCCTACAAATTGGAATGATATGAAGATGTTAGTTGAGCAGACTTTGAAGAACAATGCCAACATTAAGTGA 450 0.4044 MSKEVVKDDYITNEYKRNESFNTRKANIMKKVSELGILCGVEAGAIIFNGDPSDPTPEVWPHHEGVKQLIERCHDRPVPRRTLTIEESIQQRINIAKELLTRKRQENDVEEISQQMIQCLAGKAMPNPTNWNDMKMLVEQTLKNNANIK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00241 149 Coils Coil 95 115 - -
Accr2g00241 149 Gene3D - 13 118 IPR036879 GO:0003677|GO:0046983
Accr2g00241 149 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 49 IPR002100 GO:0003677|GO:0046983
Accr2g00241 149 SUPERFAMILY SRF-like 6 94 IPR036879 GO:0003677|GO:0046983
Accr2g00241 149 ProSiteProfiles MADS-box domain profile. 1 49 IPR002100 GO:0003677|GO:0046983
Accr2g00241 149 SMART madsneu2 1 62 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00241 Accr-Chr2 6515467 6515916 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00241 1 144 Type I MADS-box Gene Family AT5G48670 36.667 1.76e-20 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Accr2g00241 SRF-TF 5.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00241 - - pcin:129319512 158.688