Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00218 ATGATGAATCAGTGGAGTTTTGAGGAGGAGAAGCGGTTTCAAGTTGCTCTGTTGTGTTATCCGGAAGACTACCCCAATCGGTGGGAGAATATCGCGCAAGTCGTCGGCTTCTCCAGGGAGATGGTTTTTCAACGATATCAGAATCTCCAAATTGAATTGGGTTTGGTTCAGCCGTCGCAATACGTGGACTCTTCTGCTAATAATCAGCCACCCAGGCATAATAGGCGCTCCTTATGGACTTTGGAAGAACATACACTGTTCCTGCTTGGAGTACAGAAATATGGCAAGGGACATTGGAGGAATATCTCTAAATATGCAGTAATGACACGAGATGCAACTCAAGTGGCCAGTCATGCTCAAAAGTTTTATATTCGCCAGAAAGAGAGAGAAACAAGAGAGCACGCTAGAGCAAGCATACATGATATCACTTTAGCAAACTCAAACCCAGGATATTTAAACCATCTTCTTTCTTCACGTCCTCATTTGGTGATGCCTCTAATGCAACAATCTCATCAAGCAGCTTCACCAGTTCATCATGATATCCAGCTGAATCAATTATCAATACAGAATCAAGAAAGCCCACATATATCTTCATACTTTCAATTGCAGAATCCACATTACCAACCTAATTCAGAAGTTGTGGATCAATCACTTCCTTGGGATCAAGGGGATCAATCTGAGCCACAAAACTTATATGAGGAAGTAATGAAATTATTCGCTTCCCCATCACCGACTCATCACTCTGCACAACAAAATTAA 759 0.419 MMNQWSFEEEKRFQVALLCYPEDYPNRWENIAQVVGFSREMVFQRYQNLQIELGLVQPSQYVDSSANNQPPRHNRRSLWTLEEHTLFLLGVQKYGKGHWRNISKYAVMTRDATQVASHAQKFYIRQKERETREHARASIHDITLANSNPGYLNHLLSSRPHLVMPLMQQSHQAASPVHHDIQLNQLSIQNQESPHISSYFQLQNPHYQPNSEVVDQSLPWDQGDQSEPQNLYEEVMKLFASPSPTHHSAQQN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00218 252 MobiDBLite consensus disorder prediction 210 229 - -
Accr2g00218 252 SUPERFAMILY Homeodomain-like 74 128 IPR009057 -
Accr2g00218 252 Gene3D - 77 129 - -
Accr2g00218 252 CDD SANT 5 49 IPR001005 -
Accr2g00218 252 ProSiteProfiles Myb-like domain profile. 71 123 IPR001005 -
Accr2g00218 252 Pfam Myb-like DNA-binding domain 77 121 IPR001005 -
Accr2g00218 252 NCBIfam myb-like DNA-binding domain, SHAQKYF class 74 126 IPR006447 GO:0003677
Accr2g00218 252 SMART sant 75 125 IPR001005 -
Accr2g00218 252 SMART sant 1 52 IPR001005 -
Accr2g00218 252 SUPERFAMILY Homeodomain-like 3 49 IPR009057 -
Accr2g00218 252 CDD SANT 79 122 IPR001005 -
Accr2g00218 252 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 220 IPR043363 -
Accr2g00218 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 127 IPR017930 -
Accr2g00218 252 Gene3D - 2 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00218 Accr-Chr2 6120324 6121189 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr2g00218 Myb_DNA-binding 1.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00218 - - egr:104421142 125.946