Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00217 ATGATGATGACCCAGTGGACTCGCCATGAGGACAAGCTCCTTGAGCAAGCTATTGTTCTGTTTCCTGACGGTTGCCCTAATCGCTGGGAGAAGATTGCCGACTCCGTGCCTGGAGCCACCGTTGATTTGGTCTGGCAACGTTATCGTGATCTGATACACGACGTCACCGAGATTGATGCCGGTCGGGTACCGATTCCCGCTTTCCCTGACTTTTCCTCTGATACTGAACCCTCTTCCTCTGATTGGAACTTGGATAATCAAATTTCGTTCAACTCGAAGCCGCACAAGAATACCGACTCTGACAGAAAGAAGGGCACGCCTTGGACTGAGGAAGAACATAGGCTATTCCTCAAAGGATTGGAGAAATATGGCAAGGGAGATTGGAGAAGCATTTCAAGAAATGTTGTGGTGACAAGAACACCAACTCAGGTAGCTAGCCATGCTCAGAAATATTTTAATCGGCAAAGGGAAAAATCAAAGAAAGAGAGGAAGAGAGCAAGCATCCATGACATCACAACAGCAGACACCAATATTGAGCCTCTAGATCAAAACCAGATTGCTCCTTCAAGCCTTCAAACTCAGATGGTCTCTTCAGGCCTTCCATTGCATAATCAATCATCGCCAATGCTTCAGTTTAACCCTCAAAATCCTTCATTTGATCAATCTCTTGGGTTTGGGTACCCAAACTATGGTTTTCGTATCTAG 705 0.4596 MMMTQWTRHEDKLLEQAIVLFPDGCPNRWEKIADSVPGATVDLVWQRYRDLIHDVTEIDAGRVPIPAFPDFSSDTEPSSSDWNLDNQISFNSKPHKNTDSDRKKGTPWTEEEHRLFLKGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYFNRQREKSKKERKRASIHDITTADTNIEPLDQNQIAPSSLQTQMVSSGLPLHNQSSPMLQFNPQNPSFDQSLGFGYPNYGFRI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00217 234 SMART sant 104 154 IPR001005 -
Accr2g00217 234 SMART sant 2 54 IPR001005 -
Accr2g00217 234 CDD SANT 6 52 IPR001005 -
Accr2g00217 234 FunFam transcription factor MYB1R1 106 157 - -
Accr2g00217 234 NCBIfam myb-like DNA-binding domain, SHAQKYF class 103 155 IPR006447 GO:0003677
Accr2g00217 234 ProSiteProfiles SANT domain profile. 103 156 IPR017884 -
Accr2g00217 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 156 IPR017930 -
Accr2g00217 234 SUPERFAMILY Homeodomain-like 102 156 IPR009057 -
Accr2g00217 234 MobiDBLite consensus disorder prediction 69 109 - -
Accr2g00217 234 ProSiteProfiles Myb-like domain profile. 1 52 IPR001005 -
Accr2g00217 234 Gene3D - 3 65 - -
Accr2g00217 234 FunFam Transcription factor SRM1 1 65 - -
Accr2g00217 234 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Accr2g00217 234 Pfam Myb-like DNA-binding domain 107 152 IPR001005 -
Accr2g00217 234 CDD SANT 107 152 IPR001005 -
Accr2g00217 234 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 221 IPR043363 -
Accr2g00217 234 SUPERFAMILY Homeodomain-like 5 58 IPR009057 -
Accr2g00217 234 MobiDBLite consensus disorder prediction 95 109 - -
Accr2g00217 234 Gene3D - 106 157 - -
Accr2g00217 234 MobiDBLite consensus disorder prediction 72 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00217 Accr-Chr2 6083255 6084921 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g00217 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00217 - - gmx:547481 245.743