Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00207 ATGATGAGCAGCAACACATCGGAGCCTGATGGATCTTCCGAAGACTTAGGCGGATATGGCTATTACTCTTTCGGACTATCCATGGGAGTTCTTGTTATCTTCGCATTCGTCACATTCCTCTTGTACTTCTGCACCAGAAGAAGCGCCTTCAATACATCACAACATTTGACACAAAGCTTTCGCTTGCACACCATTAATGTGGTCGACAGAGATTCCAACTCTCTCCAACACCTAGGTGTGGATGAAACTACCCTCAAGACTTATCCGGTGCTGTTATACTCCGAGGTGAAGCGTGATCGGAAGGGCGGTTCTGCTGCAGCGGCGGCGGTTACGACTTGCACTATATGCTTGGGTGATTTCAATGACGGTGATTGGTTGAGGGAGTTGCCGGATTGCGGCCACTTGTTTCACCGGAAGTGTATCGATAGGTGGCTAAGGATGAACTCTTCGTGTCCGTTGTGTCGGACCTCGCCGCTTCCAACGCCGGTTTCAACTCCGCTGGCCGAAGCTGCTCCCTTGGCAAGATGA 528 0.5076 MMSSNTSEPDGSSEDLGGYGYYSFGLSMGVLVIFAFVTFLLYFCTRRSAFNTSQHLTQSFRLHTINVVDRDSNSLQHLGVDETTLKTYPVLLYSEVKRDRKGGSAAAAAVTTCTICLGDFNDGDWLRELPDCGHLFHRKCIDRWLRMNSSCPLCRTSPLPTPVSTPLAEAAPLAR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00207 175 SMART ring_2 113 154 IPR001841 -
Accr2g00207 175 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Accr2g00207 175 SUPERFAMILY RING/U-box 90 160 - -
Accr2g00207 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 159 IPR013083 -
Accr2g00207 175 FunFam E3 ubiquitin-protein ligase ATL6 68 160 - -
Accr2g00207 175 CDD RING-H2_EL5-like 113 155 - -
Accr2g00207 175 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 169 IPR045899 -
Accr2g00207 175 Pfam Ring finger domain 112 155 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00207 Accr-Chr2 5730975 5731502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00207 13 174 C3H Transcription Factor Family AT2G35910 43.210 2.65e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00207 - - pcin:129304115 212.616