Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00206 ATGAGCTCCAACACATCGGAGTCAAATGGCTCTAAGCCTTTGTTTAGCGGATATGCTTATTACTCCATCGGACTAACCACCTCAGTTCTCTTTATCTTCGCGTTCATCGCCCTAATCTTGTATCTATGCGCCCGTAGAATCCCCATGAACCCGTCACAGCTGTCGCAAGTTCGCAACGCAAGCTTTGACTTACGGACCATTACCATCCGAGCTCCTCCGGCGACAAACAGTCCAGTACAGTTAGGTGTGGATGATGAGACCTTGAAGACTTATCCGGCGCTTTTATATTCTGAAGTGAAGCGTGATCAGAAAGGTGGTGCCGGTGGTTGTGGTGGTGGTGATTCAGCAGTGGCTACTTGTTCAATATGCTTGGGGGATTTCAGTGAAAGTGAGTGGTTGAGGGAGTTGCCGGATTGCGGTCACTTGTTTCACCGGAAGTGTATCGATATGTGGCTGAGGATGAAATCTTCGTGTCCATTGTGTCGGACCTCGCCGCTTCCGGCGCCGGTTTCAACTCCACTGGCCGAAGTTGCTCCCTTGGCAAGATCAAGGGTTTAG 558 0.5036 MSSNTSESNGSKPLFSGYAYYSIGLTTSVLFIFAFIALILYLCARRIPMNPSQLSQVRNASFDLRTITIRAPPATNSPVQLGVDDETLKTYPALLYSEVKRDQKGGAGGCGGGDSAVATCSICLGDFSESEWLRELPDCGHLFHRKCIDMWLRMKSSCPLCRTSPLPAPVSTPLAEVAPLARSRV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00206 185 CDD RING-H2_EL5-like 120 162 - -
Accr2g00206 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 166 IPR013083 -
Accr2g00206 185 Pfam Ring finger domain 119 162 IPR001841 -
Accr2g00206 185 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 176 IPR045899 -
Accr2g00206 185 SUPERFAMILY RING/U-box 94 167 - -
Accr2g00206 185 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Accr2g00206 185 SMART ring_2 120 161 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00206 Accr-Chr2 5723791 5724348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00206 21 183 C3H Transcription Factor Family AT2G35910 43.373 8.75e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00206 - - pcin:129304115 270.011