Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00205 ATGAGCAGCAACACATCGAAACCTGAGGGATCTTCCAAAGACTTAGGTGGATATGGCTATTACTCTTTCGGACTATCCATGGGAGTTCTTGTTATCTTCGCATTCGTCACCTTCCTCTTGTACTTCTGCACCAGAAGAAGCGCCTTCAATACATCGCAAAATTTCACACCAAGCTTTCGCTTGCGCACCGTTAATGTCGTCGACGGAGATTCCAACTCTCTCCAACAGCTAGGTGTGGATGAAACCACCCTCAAGACTTATCCAGTGCTGTTATACTCCGACGTGAAGCATGATCGGAAGGGCGGTTCTGCTGCGGCGGCAGCGGCAACGACTTGCACGATATGCTTGGGTGATTTCAGTGACGGTGAGTGGTTGAGGGAGTTGCCCGATTGTGGTCACTTGTTTCACCGGAAGTGTGTCGATATGTGGCTGAGGATGAACTCTTCGTGTCCGTTGTGTCGGACCTCGCCGCTTCCGACGCCGGTCTCAACTCCACTCGCCGAAGTTGCTCCCTTGGCAAGATGA 525 0.5162 MSSNTSKPEGSSKDLGGYGYYSFGLSMGVLVIFAFVTFLLYFCTRRSAFNTSQNFTPSFRLRTVNVVDGDSNSLQQLGVDETTLKTYPVLLYSDVKHDRKGGSAAAAAATTCTICLGDFSDGEWLRELPDCGHLFHRKCVDMWLRMNSSCPLCRTSPLPTPVSTPLAEVAPLAR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00205 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 158 IPR013083 -
Accr2g00205 174 CDD RING-H2_EL5-like 112 154 - -
Accr2g00205 174 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 168 IPR045899 -
Accr2g00205 174 SUPERFAMILY RING/U-box 87 159 - -
Accr2g00205 174 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Accr2g00205 174 FunFam E3 ubiquitin-protein ligase ATL6 68 159 - -
Accr2g00205 174 Pfam Ring finger domain 111 154 IPR001841 -
Accr2g00205 174 SMART ring_2 112 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00205 Accr-Chr2 5718523 5719047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00205 12 173 C3H Transcription Factor Family AT2G35910 44.785 1.44e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00205 - - pcin:129304115 233.417