Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g00205 | ATGAGCAGCAACACATCGAAACCTGAGGGATCTTCCAAAGACTTAGGTGGATATGGCTATTACTCTTTCGGACTATCCATGGGAGTTCTTGTTATCTTCGCATTCGTCACCTTCCTCTTGTACTTCTGCACCAGAAGAAGCGCCTTCAATACATCGCAAAATTTCACACCAAGCTTTCGCTTGCGCACCGTTAATGTCGTCGACGGAGATTCCAACTCTCTCCAACAGCTAGGTGTGGATGAAACCACCCTCAAGACTTATCCAGTGCTGTTATACTCCGACGTGAAGCATGATCGGAAGGGCGGTTCTGCTGCGGCGGCAGCGGCAACGACTTGCACGATATGCTTGGGTGATTTCAGTGACGGTGAGTGGTTGAGGGAGTTGCCCGATTGTGGTCACTTGTTTCACCGGAAGTGTGTCGATATGTGGCTGAGGATGAACTCTTCGTGTCCGTTGTGTCGGACCTCGCCGCTTCCGACGCCGGTCTCAACTCCACTCGCCGAAGTTGCTCCCTTGGCAAGATGA | 525 | 0.5162 | MSSNTSKPEGSSKDLGGYGYYSFGLSMGVLVIFAFVTFLLYFCTRRSAFNTSQNFTPSFRLRTVNVVDGDSNSLQQLGVDETTLKTYPVLLYSDVKHDRKGGSAAAAAATTCTICLGDFSDGEWLRELPDCGHLFHRKCVDMWLRMNSSCPLCRTSPLPTPVSTPLAEVAPLAR | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g00205 | 174 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 158 | IPR013083 | - | |
Accr2g00205 | 174 | CDD | RING-H2_EL5-like | 112 | 154 | - | - | |
Accr2g00205 | 174 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 168 | IPR045899 | - | |
Accr2g00205 | 174 | SUPERFAMILY | RING/U-box | 87 | 159 | - | - | |
Accr2g00205 | 174 | ProSiteProfiles | Zinc finger RING-type profile. | 112 | 154 | IPR001841 | - | |
Accr2g00205 | 174 | FunFam | E3 ubiquitin-protein ligase ATL6 | 68 | 159 | - | - | |
Accr2g00205 | 174 | Pfam | Ring finger domain | 111 | 154 | IPR001841 | - | |
Accr2g00205 | 174 | SMART | ring_2 | 112 | 153 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g00205 | Accr-Chr2 | 5718523 | 5719047 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g00205 | 12 | 173 | C3H Transcription Factor Family | AT2G35910 | 44.785 | 1.44e-40 | 134 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g00205 | - | - | pcin:129304115 | 233.417 |