Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00204 ATGAGCTCCAACACATCGGATTCATATGGCTCTAAGCCTTTGTTAAGCGGATATGCCTATTACTACATCGGACTAACCTCCGGAATTCTCCTTATCTTCGCGTTCATCGCTGTAACCTTGTACCTATGCTCCCGAAGAATCGCCATGAACCCGTCATGGCTGTCGCAAGTTCGCAACGCAAGCTTTGACTTACGGACCATTAACATCGGAGCTCCTCCGGCGACAAACAGTCCAGTACAGTTAGGTGTGGATGATGAGACCTTGAATACTTATCCGATGCTTTTATATTCTAAAGTGAAGCGAGATCGGAAAGGAGGTGCGGGTTGTGGTGCGGCTACTTGTTCAATATGCTTGGGGGATTTCACTGAAAGTGAGTGGTTGAGGGAGTTGCCGGATTGCCGTCACTTGTTTCACCAGAAGTGTATCGATATATGGCTGAGGATGAACACTTCGTGTCCGTTGTGTCGGACCTCGCCGCTTCCGACGCCAGTTTCAACTCCACTGGCTGAAGTTGCTCCCTTGGCAAGATCAGGTGCTTGA 540 0.4926 MSSNTSDSYGSKPLLSGYAYYYIGLTSGILLIFAFIAVTLYLCSRRIAMNPSWLSQVRNASFDLRTINIGAPPATNSPVQLGVDDETLNTYPMLLYSKVKRDRKGGAGCGAATCSICLGDFTESEWLRELPDCRHLFHQKCIDIWLRMNTSCPLCRTSPLPTPVSTPLAEVAPLARSGA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00204 179 CDD RING-H2_EL5-like 114 156 - -
Accr2g00204 179 FunFam E3 ubiquitin-protein ligase ATL6 73 161 - -
Accr2g00204 179 SUPERFAMILY RING/U-box 113 161 - -
Accr2g00204 179 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Accr2g00204 179 Pfam Ring finger domain 113 156 IPR001841 -
Accr2g00204 179 PANTHER RING-H2 FINGER PROTEIN ATL67 19 176 IPR044289 GO:0016567|GO:0016740
Accr2g00204 179 SMART ring_2 114 155 IPR001841 -
Accr2g00204 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 160 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00204 Accr-Chr2 5688541 5689080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00204 21 179 C3H Transcription Factor Family AT2G35910 45.679 2.71e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00204 - - pcin:129304115 270.396