Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00203 ATGAATCTCAACAGCAGCACCGCCCCCCTCACCTTCGGTATCATATTCCTAGTCCTATCCATCTGCCTCGCCTGCATCCGCCTCCGCAAGCTCGCAGGCAACCCCGCCATGTTCAATTTCCTCGCCCGTCCTTCCTCCACCACCGCCGCCGTGGAGCTCCCCACCATAGCAGAACGTGGCCTCGATGACTCCACCATCAACACCTTCCCAAAGCTCTCCTACTCAGAGATGAAGAACAGCTCTTATTATAATATTGAAGATCCTTCTAATTCTTCTTCTTGTTCGATTTGTTTAGCAGATTATAAGGAAGATGACATGTTAAGGTTGCTTCCAGATTGTGGTCATCTTTTTCATCTTCTTTGCGTTGACCCTTGGCTCAAGGTACATAACACTTGCCCTATCTGTCGAACTCGAACTTCCTCTTCTTCTGTGAAAGCTCCCGACGACGATCAGTCAAATAACTCCGTCGTCAACGACGGTTCATAG 486 0.4918 MNLNSSTAPLTFGIIFLVLSICLACIRLRKLAGNPAMFNFLARPSSTTAAVELPTIAERGLDDSTINTFPKLSYSEMKNSSYYNIEDPSNSSSCSICLADYKEDDMLRLLPDCGHLFHLLCVDPWLKVHNTCPICRTRTSSSSVKAPDDDQSNNSVVNDGS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00203 161 SMART ring_2 94 135 IPR001841 -
Accr2g00203 161 FunFam E3 ubiquitin-protein ligase ATL6 50 142 - -
Accr2g00203 161 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Accr2g00203 161 SUPERFAMILY RING/U-box 93 141 - -
Accr2g00203 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 141 IPR013083 -
Accr2g00203 161 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 145 IPR045899 -
Accr2g00203 161 Pfam Ring finger domain 93 136 IPR001841 -
Accr2g00203 161 MobiDBLite consensus disorder prediction 138 161 - -
Accr2g00203 161 CDD RING-H2_PA-TM-RING 93 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00203 Accr-Chr2 5651327 5651812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00203 60 150 C3H Transcription Factor Family AT5G06490 53.846 4.83e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00203 - - pcin:129319166 198.749