LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g00185	ATGGATCTCTCCCAAATAACAACTATTGAAGACATTGACATAAGTGGAAGTTTAGTATATGCAGATGGCATTGTTGATTTGGAGAAAGACAATGATGAATGGCGAGAACAAGATCAGTGTCAAATCATGGAGGATGAAGATGGTGATGATAGTGTAGAAGAAATTGTGGGAGATGATGATAGTGGATTCAGTGAGGCACCTATTTTAGGGAGAGTGTTTAAGACAGCAGAAGAAGCTTATGGTTTCTATAATGACTATGCACAAGGTAAAGGATTTGGAACACGTAAGCAATATACTAGCAGGAATATGAAAACGCAGCAAATATATAGGTGGAATTATGTGTGCTCAAAGCAAGGTGTCAAGAAACATAATGATAAAATAGTTGGTGATCACAATGTCAAAAGGCGTAGGGATTCAAGGACAAATTGTTTAGCGATGTTTCAAGTAAAGTTAGTGGATGGATTATGGATCGTAAAGAAGTTTAATGATACACATAATCATCCATTGATTATGACTCCTTCAAAGGTGAACAAGTTTCCTTCTCACGGTGATTTACGACGCTCAAATTTCACTAAATCACTTGTTACTAAGCTTTTCGAGGAGGGTTTAACGTCTTCAAAAATTTCAAAGGTGGTGAATGCTATGAACAAAGAAGTCAATATTACTCCTATTCAAGTCAGCACTATTCTATCAGGACAAAGAAAGAATAATGTAGGGCGAGAATGTCAAGGCGTCATCAAACACTTTCAAAGGAAGTCCGCTCTTGATGGAGCTTTTTATTTTGATATGCATCTGGCAGAAGATGGTTTACTAAGAAGCGTTTTTTGGGTGGATGGTAGGTCGAGAGCTGCATATGCGCATTTTGGCGAAGTCCTTGTGTTTGACGTGACTTATAAAACGAACAAGTTTAGGTTTCCTTTTGCCCCTTTTGTGGGGGTTAATCACCACGGGCAATCAATTTTATTTGCAGCCGCTTTGTTAGAAGATGAAACAGAGGCAACATTTACATGGTTGTTTGAACAGTTTCGGACATGTATGTTTGACAAGTCTCATATTGCTATTACCACAGATCAAGACAAAGCGATGGGAAAAGCAATTGCCAATATATTTCCAAAAGCACGACACTGTTTTTGTGCATGGCATATCAAAAAACATGTTATGGAGCATAGTCAAGCTTTGCGCACACAATTTAAAGATAGTTTTGATATTGACTTCCGTGAGTGGTATAAAAGTCGAGACATTGATGAGTTCGAAGGCAAGTGGGCAGAATTGAGGACTAAATATGATATTAAAGCAGGTAGTTGGTTGTCCAACATGTATAAATCACGTCATCATTGGGCAAAGGCATACTTGAAAAATACCTTTTTTGTTGGAATGACCACAAGCGGCCGAAGTGAGAGCATCAATTCATTTTTTGATGGATACGTCAACTCTAACACGATGTTAAATGACTTTGTGACCCAGTATGACAAAGCAATCAAGTCCAGGAGGGATGCAGAAGAAAATAAGGATTTCAAAACTAGAAATACAAAAGCAATTTTGGAGACTAATCATCCAATTGAAGCAATAACTTGCTAG	1578	0.3783	MDLSQITTIEDIDISGSLVYADGIVDLEKDNDEWREQDQCQIMEDEDGDDSVEEIVGDDDSGFSEAPILGRVFKTAEEAYGFYNDYAQGKGFGTRKQYTSRNMKTQQIYRWNYVCSKQGVKKHNDKIVGDHNVKRRRDSRTNCLAMFQVKLVDGLWIVKKFNDTHNHPLIMTPSKVNKFPSHGDLRRSNFTKSLVTKLFEEGLTSSKISKVVNAMNKEVNITPIQVSTILSGQRKNNVGRECQGVIKHFQRKSALDGAFYFDMHLAEDGLLRSVFWVDGRSRAAYAHFGEVLVFDVTYKTNKFRFPFAPFVGVNHHGQSILFAAALLEDETEATFTWLFEQFRTCMFDKSHIAITTDQDKAMGKAIANIFPKARHCFCAWHIKKHVMEHSQALRTQFKDSFDIDFREWYKSRDIDEFEGKWAELRTKYDIKAGSWLSNMYKSRHHWAKAYLKNTFFVGMTTSGRSESINSFFDGYVNSNTMLNDFVTQYDKAIKSRRDAEENKDFKTRNTKAILETNHPIEAITC	525

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g00185	525	Pfam	MULE transposase domain	291	384	IPR018289	-
	Accr2g00185	525	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	60	521	IPR031052	GO:0006355
	Accr2g00185	525	Pfam	FAR1 DNA-binding domain	82	170	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g00185	Accr-Chr2	5195758	5197335	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Accr2g00185		MULE	4e-29	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g00185	-		-	lsv:128132274	508.064