Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g00171 | ATGAAGAGAGAAAGATCAGATGATCACAGCATCGCCATGGCCAACTGCTTGATGCTGCTTTCCGAGGCCGCGGCTTCCTTCGGCTCCGTCTCCGCCACCGACCGTGTCTTCGTCTGCAAGACCTGTAACCGCCAGTTCTCGTCGTTCCAGGCACTCGGCGGCCACCGTGCCAGCCACAAGAAGCTGAGGATAATGGCCGGGGAGGATAGTAACAACAGTTACGATCTTTTTCTTCATTCTTCTTCGTCGTCGTCACCGGCTAAACCTAAAACTCATGAGTGCTCAATTTGTGGATTGGAGTTCGCCATAGGTCAGGCTTTAGGCGGTCACATGAGAAGACACAGAGCTCCAACATCTCACAATAATAATAATAGTAAGAACTCCTCGTCGTCGTCAAGCGCAGAGTTTGATTCAGATGCAAAGAAGAAGAAGACAGAGAAGAGCAAAAGGGTTCTGTTTCTGGACTTGAACTTGACGCCGCTTGAGAACGATTTGGAGATTTTACGGATAAAAACATCAACTCCTTTAGTAGTTACGCTTTAG | 543 | 0.4862 | MKRERSDDHSIAMANCLMLLSEAAASFGSVSATDRVFVCKTCNRQFSSFQALGGHRASHKKLRIMAGEDSNNSYDLFLHSSSSSSPAKPKTHECSICGLEFAIGQALGGHMRRHRAPTSHNNNNSKNSSSSSSAEFDSDAKKKKTEKSKRVLFLDLNLTPLENDLEILRIKTSTPLVVTL | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g00171 | 180 | Gene3D | Classic Zinc Finger | 35 | 114 | - | - | |
Accr2g00171 | 180 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 37 | 64 | IPR013087 | - | |
Accr2g00171 | 180 | Pfam | C2H2-type zinc finger | 36 | 61 | - | - | |
Accr2g00171 | 180 | Pfam | C2H2-type zinc finger | 92 | 117 | - | - | |
Accr2g00171 | 180 | MobiDBLite | consensus disorder prediction | 120 | 135 | - | - | |
Accr2g00171 | 180 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 94 | 114 | IPR013087 | - | |
Accr2g00171 | 180 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 7 | 163 | - | - | |
Accr2g00171 | 180 | SMART | c2h2final6 | 92 | 114 | IPR013087 | - | |
Accr2g00171 | 180 | SMART | c2h2final6 | 37 | 59 | IPR013087 | - | |
Accr2g00171 | 180 | MobiDBLite | consensus disorder prediction | 110 | 142 | - | - | |
Accr2g00171 | 180 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 39 | 59 | IPR013087 | - | |
Accr2g00171 | 180 | SUPERFAMILY | beta-beta-alpha zinc fingers | 35 | 114 | IPR036236 | - | |
Accr2g00171 | 180 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 92 | 119 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g00171 | Accr-Chr2 | 4942943 | 4943485 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g00171 | 1 | 170 | C2H2 Transcription Factor Family | AT2G28710 | 47.126 | 9.66e-40 | 130 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Accr2g00171 | zf-C2H2_6 | 6e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g00171 | - | - | gmx:100781134 | 184.111 |