Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00140 ATGCGCGCCTCCTTCTCTCTCCTCCGGTACTTTCTCTCTCAACTGGGGATCAATCGACAGCTCCTGGGAAATAATTCTGAAAGCAGCGGCAACGCCGTAGACAACAACTTCTTCGAGTGCTATGCTTGCACTCAGGTCGGCGTTCCGGTGTTCCACTCCACAAGCTGCGACGGCTATAACCAGCTCCAATGGGAGGCCTCCGCCGGTTCTTCCCTAATCCCCATCCAAAACCGGAAAACCTCCGGCAACCCGATGACGAGGCCCAAATCGGGTCCGTTCGGGCGAGTTATCGACCCGAGAAGCAAGCGCGTGCAGTCGTGGAACAGAGTGTTGTTGTTATCGCGTGGGATGGCGCTGGCCATCGACCCATTGTTCTTCTACGCGCTGTCCATCGGTAGGGAAGGGAGGCCGTGCCTGTACATGGATGAGCGGTTGGCAGCGACCGTGACGGTGCTTCGCACGTGTGTGGACGTGATGCACTTGTTCCACGTATGGCTGCAGCTGCGGATGGCTTACGTGTCGAAGGAGTCGCTGGTGGTTGGGTGCGGGAAGCTCGTGTGGGATGCACGTGCCATAGCGGCTCATTACCTGGGTTCCTTCAGGCGCTTCTGGTTCGATGCCTTTGTCATCTTCCCCATTCCGCAGGCTGTATTTTGGTTAGTACTGCCCAAATTAATAAGAGAAGAGCGAATTAAACTCATAGTGACAATACTGCTATTAATGTTCTCGTTCCAGTTTCTGCCTAAGGTCTACCACAGCATCATCTTGATGACAAGCATGAAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGATTTGGCCTCAATCTCATTGCTTACTTAATTGCTTCTCATTTTACTGGAGGGTGCTGGTACGTCCTGGCAATCCAACGTGTTGTATCATGTCTCCAGAAGCAGTGTGAGAGTAGTCCTGGTTGTGATCTGATGTCTCTTTCATGCTCAGATGACGTATGCTACCAGAATCTGTTGCGAAACAGCACAACACTCGAAAATCTATGTGGCGGAAACTCCACGGTAGTGGTGAGAAAGACTTCGTGCTTGGATCCTGAAGGACCTTTCAATTATGGTATCTACCAGTGGGCTCTTCCAATCATATCCAGCAATTCCTTGGCTGTCAAGATTCTATACCCTATATTTTGGGGTTTGATGACTCTCAGCACATTTGGCAACGTTCTTGAACCCACAAGTGACTGGCTAGAAGTAATTTTCAGCATATGCATCGTACTTAGTGGATTACTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATTCCTACTTGCAGTAATGGCAAAGAAGAGAAAGATGCAGCTGAGGTGTCGCGACATGGAGTGGTGGATGAGGAGGAGGCAGCTGCCATCCCATTTAAGACGAAGGGTTCGCCGTTTTGAGCGTCACAGATGGGCTGCCTTGGGGGGAGAGGACGAAATGGAATTGATAAAGGACTTGCCAGAAGGTCTGAGGAGGGACATCAAGCGCTATCTTTGCTTAGACCTCATCAAAAAGGTACCTCTGTTTCACAACTTGGATGATCTCATTCTTGATAACATGTGTGACAGGGTTAAACCCTTAATCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGAGACCCAGTGAGAAGGATGGTGTTCATTGTTCGTGGAAGAATAAAACGCATCCAAAGGCTAAGCAAAGGAGTGATAGCCACGAGCAACCTTGAAGCCGGAGGCTTCCTGGGTGATGAGCTGCTGTCATGGTGCCTTCGCCGGCCTTTTATAGACCGGCTTCCGGCGTCCTCAGCAACATTTGTGTGTGTTGAATCAACAGAAGCCTTTGGCCTGAGTGATGAACACCTCAAGTACATTACTGAGCACTTCCGCTACAAATTTGCTAATGAAAGACTCAAGAGAACAGCTAGGTATTACTCATCCAATTGGCGAACTTGGGCTGCTGTTAATATCCAACTCGCTTGGCAAAATTACAGGAAAAGGAGGAGTAGAGGTTCAGTGATATCTGTAACTGAAAATGGAGCCAATGAACGCAGGCTTCTGCAATATGCTGCTATGTTTATGTCAATAAGGCCACATGACCATCTTGAATAA 2109 0.4874 MRASFSLLRYFLSQLGINRQLLGNNSESSGNAVDNNFFECYACTQVGVPVFHSTSCDGYNQLQWEASAGSSLIPIQNRKTSGNPMTRPKSGPFGRVIDPRSKRVQSWNRVLLLSRGMALAIDPLFFYALSIGREGRPCLYMDERLAATVTVLRTCVDVMHLFHVWLQLRMAYVSKESLVVGCGKLVWDARAIAAHYLGSFRRFWFDAFVIFPIPQAVFWLVLPKLIREERIKLIVTILLLMFSFQFLPKVYHSIILMTSMKKVTGYIFGTIWWGFGLNLIAYLIASHFTGGCWYVLAIQRVVSCLQKQCESSPGCDLMSLSCSDDVCYQNLLRNSTTLENLCGGNSTVVVRKTSCLDPEGPFNYGIYQWALPIISSNSLAVKILYPIFWGLMTLSTFGNVLEPTSDWLEVIFSICIVLSGLLLFTLLIGNIQVFLLAVMAKKRKMQLRCRDMEWWMRRRQLPSHLRRRVRRFERHRWAALGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNMCDRVKPLIFSKDEKIIREGDPVRRMVFIVRGRIKRIQRLSKGVIATSNLEAGGFLGDELLSWCLRRPFIDRLPASSATFVCVESTEAFGLSDEHLKYITEHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWQNYRKRRSRGSVISVTENGANERRLLQYAAMFMSIRPHDHLE 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00140 702 ProSiteProfiles cAMP/cGMP binding motif profile. 514 593 IPR000595 -
Accr2g00140 702 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 89 671 - -
Accr2g00140 702 SUPERFAMILY Voltage-gated potassium channels 98 435 - -
Accr2g00140 702 Gene3D Helix hairpin bin 440 505 - -
Accr2g00140 702 SMART cnmp_10 514 640 IPR000595 -
Accr2g00140 702 Pfam Ion transport protein 106 432 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr2g00140 702 CDD CAP_ED 514 624 IPR000595 -
Accr2g00140 702 Gene3D Jelly Rolls 512 630 IPR014710 -
Accr2g00140 702 SUPERFAMILY cAMP-binding domain-like 441 628 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00140 Accr-Chr2 4243070 4246993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00140 39 702 Ion Channels AT5G15410 74.481 0.0 978
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00140 K05391 - tcc:18601600 1087.4