Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00139 ATGCGCGCCTCCTTCTCTCTCCTCCGGGGGATCAATCGACAGCTCCTGGGAAATAATTCTGAAAGCAGCGGCAACGCCGTAGACAACAACTTCTTCGAGTGCTATGCTTGCACTCAGGTCGGCGTTCCGGTGTTCCACTCCACAAGCTGCGACGGCTATAACCAGCTCCAATGGGAGGCCTCCGCCGGTTCTTCCCTAATCCCCATCCAAAACCGGAAAACCTCCGGCAACCCGATGACGAGGCCCAAATCGGGTCCGTTCGGGCGAGTTATCGACCCGAGAAGCAAGCGCGTGCAGTCGTGGAACAGAGTGTTGTTGTTATCGCGTGGGATGGCGCTGGCCATCGACCCATTGTTCTTCTACGCGCTGTCCATCGGTAGGGAAGGGAGGCCGTGCCTGTACATGGATGAGCGGTTGGCAGCGACCGTGACGGTGCTTCGCACGTGTGTGGACGTGATGCACTTGTTCCACGTATGGCTGCAGCTGCGGATGGCTTACGTGTCGAAGGAGTCGCTGGTGGTTGGGTGCGGGAAGCTCGTGTGGGATGCACGTGCCATAGCGGCTCATTACCTGGGTTCCTTCAGGCGCTTCTGGTTCGATGCCTTTGTCATCTTCCCCATTCCGCAGGCTGTATTTTGGTTAGTACTGCCCAAATTAATAAGAGAAGAGCGAATTAAACTCATAGTGACAATACTGCTATTAATGTTCTCGTTCCAGTTTCTGCCTAAGGTCTACCACAGCATCATCTTGATGACAAGCATGAAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGATTTGGCCTCAATCTCATTGCTTACTTAATTGCTTCTCATTTTACTGGAGGGTGCTGGTACGTCCTGGCAATCCAACGTGTTGTATCATGTCTCCAGAAGCAGTGTGAGAGTAGTCCTGGTTGTGATCTGATGTCTCTTTCATGCTCAGATGACGTATGCTACCAGAATCTGTTGCGAAACAGCACAACACTCGAAAATCTATGTGGCGGAAACTCCACGGTAGTGGTGAGAAAGACTTCGTGCTTGGATCCTGAAGGACCTTTCAATTATGGTATCTACCAGTGGGCTCTTCCAATCATATCCAGCAATTCCTTGGCTGTCAAGATTCTATACCCTATATTTTGGGGTTTGATGACTCTCAGCACATTTGGCAACGTTCTTGAACCCACAAGTGACTGGCTAGAAGTAATTTTCAGCATATGCATCGTACTTAGTGGATTACTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATTCCTACTTGCAGTAATGGCAAAGAAGAGAAAGATGCAGCTGAGGTGTCGCGACATGGAGTGGTGGATGAGGAGGAGGCAGCTGCCATCCCATTTAAGACGAAGGGTTCGCCGTTTTGAGCGTCACAGATGGGCTGCCTTGGGGGGAGAGGACGAAATGGAATTGATAAAGGACTTGCCAGAAGGTCTGAGGAGGGACATCAAGCGCTATCTTTGCTTAGACCTCATCAAAAAGGTACCTCTGTTTCACAACTTGGATGATCTCATTCTTGATAACATGTGTGACAGGGTTAAACCCTTAATCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGAGACCCAGTGAGAAGGATGGTGTTCATTGTTCGTGGAAGAATAAAACGCATCCAAAGGCTAAGCAAAGGAGTGATAGCCACGAGCAACCTTGAAGCCGGAGGCTTCCTGGGTGATGAGCTGCTGTCATGGTGCCTTCGCCGGCCTTTTATAGACCGGCTTCCGGCGTCCTCAGCAACATTTGTGTGTGTTGAATCAACAGAAGCCTTTGGCCTGAGTGATGAACACCTCAAGTACATTACTGAGCACTTCCGCTACAAATTTGCTAATGAAAGACTCAAGAGAACAGCTAGGTATTACTCATCCAATTGGCGAACTTGGGCTGCTGTTAATATCCAACTCGCTTGGCAAAATTACAGGAAAAGGAGGAGTAGAGGTTCAGTGATATCTGTAACTGAAAATGGAGCCAATGAACGCAGGCTTCTGCAATATGCTGCTATGTTTATGTCAATAAGGCCACATGACCATCTTGAATAA 2091 0.4883 MRASFSLLRGINRQLLGNNSESSGNAVDNNFFECYACTQVGVPVFHSTSCDGYNQLQWEASAGSSLIPIQNRKTSGNPMTRPKSGPFGRVIDPRSKRVQSWNRVLLLSRGMALAIDPLFFYALSIGREGRPCLYMDERLAATVTVLRTCVDVMHLFHVWLQLRMAYVSKESLVVGCGKLVWDARAIAAHYLGSFRRFWFDAFVIFPIPQAVFWLVLPKLIREERIKLIVTILLLMFSFQFLPKVYHSIILMTSMKKVTGYIFGTIWWGFGLNLIAYLIASHFTGGCWYVLAIQRVVSCLQKQCESSPGCDLMSLSCSDDVCYQNLLRNSTTLENLCGGNSTVVVRKTSCLDPEGPFNYGIYQWALPIISSNSLAVKILYPIFWGLMTLSTFGNVLEPTSDWLEVIFSICIVLSGLLLFTLLIGNIQVFLLAVMAKKRKMQLRCRDMEWWMRRRQLPSHLRRRVRRFERHRWAALGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNMCDRVKPLIFSKDEKIIREGDPVRRMVFIVRGRIKRIQRLSKGVIATSNLEAGGFLGDELLSWCLRRPFIDRLPASSATFVCVESTEAFGLSDEHLKYITEHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWQNYRKRRSRGSVISVTENGANERRLLQYAAMFMSIRPHDHLE 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00139 696 SMART cnmp_10 508 634 IPR000595 -
Accr2g00139 696 CDD CAP_ED 508 618 IPR000595 -
Accr2g00139 696 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 83 665 - -
Accr2g00139 696 Gene3D Helix hairpin bin 434 499 - -
Accr2g00139 696 SUPERFAMILY cAMP-binding domain-like 435 622 IPR018490 -
Accr2g00139 696 ProSiteProfiles cAMP/cGMP binding motif profile. 508 587 IPR000595 -
Accr2g00139 696 Pfam Ion transport protein 100 426 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr2g00139 696 SUPERFAMILY Voltage-gated potassium channels 92 429 - -
Accr2g00139 696 Gene3D Jelly Rolls 506 624 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00139 Accr-Chr2 4243070 4246993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00139 33 696 Ion Channels AT5G15410 74.481 0.0 978
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00139 K05391 - qsa:O6P43_004432 1087.79