Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00130 ATGGCCGCTAAAAATGGCCATCCGGCACCGCCGCCTCGTCCTACCATCACTCTCCCGCCACGACCTTCCATGGACGCCTTCTTCACCGGTGGACTCGGTCTAAGCCCTGGCCCCATGACTCTCGTCTCCAGCTTCTTCACCGACACCTACCGTGACTCCGATTGCCGCTCTTTCTCTCAGCTTCTCGCCGGAGCCATGGCTTCGCCGCTTGCTCTCGGCGCCAGGCCTAGTTTCCTACCGGACAATTCCACCACTTCTGAGGATGGAGCAAAGAAGAATTTGGGGTTCAAGCAGAGTAGACCAATGAATTTGGTTGTTGCTCGTTCCCCATTGTTTACAATCCCGCCTGGGCTTAGCCCTTCTGGTTTGCTCAATTCTCCGGGCTTCTTTTCGCCCCAGAGCCCCTTTGGGATGTCACACCAACAGGCTCTAGCACAGGTCACAGCTCAAGCTGTCCTAGCACAATCACAAAAGCATGTGCCAGCTGATTTTCACCCATCTTCGGTAACAGCCCCTTCTGAACCATTGGCAGTGCAGCCATCCAGTGCTCCAAGTGAAGGATCAGAGATGCAACTACCATCAGTATTAGAACCTAAAGGTGCCTTGGTGGAAATACCAGAAGTTTCTCAAGCTGATAACAAATATCAAACTTCTTCTATGGGCGTTGATAAGCCAGCAGATGATGGCTATAACTGGCGTAAGTATGGGCAGAAGCAAGTCAAGGGGAGTGAGTATCCACGGGGATACTACAAGTGTACCTATCTGAATTGCCCTGTAAAGAAAAAGATTGAGCGTGCCATTGATGGCCATATAACTGAAATTATCTATAAAGGTCAGCATGACCATGAAAAGCCTCAGCCAAATAGGCGTGCTGCCAAAGATAATTGTGAATCAAATGAAGATAAAAGCATTCAGGTCATGCCTGAGTCAAACACACAGGGTAGGGTTAGAAATTCAAATGTGTTAGGTGAAAGCATGCCTGACCATTCAATGCCTGAGTGTGACCTGACCTCTAATCAAGAGGCTCCAAAACAGTCATCTGGATCACGTGAGAGTGAGGAAGCACTTGATGCAAATATTACAGAAGAAGATGGAGATGTTGGTGAGCCAGACCCAAAAAGGAGGAGCACTGAGGCTGGATCTTCTGAAGCATCTTTATCCCACAAGACTGTTACAGAACCTAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTGTTAGATGATGGCTACAGGTGGCGTAAGTATGGCCAGAAAGTAGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTAGTGCAGGGTGTAATGTTCGTAAGCATGTTGAGAGATCTCCAAGAGACCCTAAAGCTGTCATAACTAAGTATGAGGGTAAACATAACCATGATGTGCCTGCTTCTAGAAATGGCAGCCACACCACAGCAACTACCAATTCAATGCCTTCAAAACCACACAGAATGACACCTGGGAAACATCCTTTGCTTAAAGATATGGATTTTGGAAACAATGACCAAAGGCCAGCTGCTTTACGCTTAAAAGAAGAGAAAAAAGGAGTATAA 1566 0.4713 MAAKNGHPAPPPRPTITLPPRPSMDAFFTGGLGLSPGPMTLVSSFFTDTYRDSDCRSFSQLLAGAMASPLALGARPSFLPDNSTTSEDGAKKNLGFKQSRPMNLVVARSPLFTIPPGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSQKHVPADFHPSSVTAPSEPLAVQPSSAPSEGSEMQLPSVLEPKGALVEIPEVSQADNKYQTSSMGVDKPADDGYNWRKYGQKQVKGSEYPRGYYKCTYLNCPVKKKIERAIDGHITEIIYKGQHDHEKPQPNRRAAKDNCESNEDKSIQVMPESNTQGRVRNSNVLGESMPDHSMPECDLTSNQEAPKQSSGSRESEEALDANITEEDGDVGEPDPKRRSTEAGSSEASLSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERSPRDPKAVITKYEGKHNHDVPASRNGSHTTATTNSMPSKPHRMTPGKHPLLKDMDFGNNDQRPAALRLKEEKKGV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00130 521 ProSiteProfiles WRKY domain profile. 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 Pfam WRKY DNA -binding domain 408 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 Pfam WRKY DNA -binding domain 227 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 MobiDBLite consensus disorder prediction 379 393 - -
Accr2g00130 521 MobiDBLite consensus disorder prediction 277 300 - -
Accr2g00130 521 MobiDBLite consensus disorder prediction 1 22 - -
Accr2g00130 521 SUPERFAMILY WRKY DNA-binding domain 224 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 MobiDBLite consensus disorder prediction 332 346 - -
Accr2g00130 521 ProSiteProfiles WRKY domain profile. 402 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 MobiDBLite consensus disorder prediction 163 193 - -
Accr2g00130 521 MobiDBLite consensus disorder prediction 469 486 - -
Accr2g00130 521 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 125 484 IPR044810 GO:0003700
Accr2g00130 521 MobiDBLite consensus disorder prediction 301 325 - -
Accr2g00130 521 Gene3D WRKY domain 392 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 Gene3D WRKY domain 210 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 FunFam WRKY transcription factor 57 393 467 - -
Accr2g00130 521 MobiDBLite consensus disorder prediction 459 521 - -
Accr2g00130 521 MobiDBLite consensus disorder prediction 172 189 - -
Accr2g00130 521 FunFam WRKY transcription factor 214 286 - -
Accr2g00130 521 SUPERFAMILY WRKY DNA-binding domain 399 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 SMART WRKY_cls 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 SMART WRKY_cls 407 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00130 521 MobiDBLite consensus disorder prediction 277 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00130 Accr-Chr2 4148166 4151330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00130 13 518 WRKY Transcription Factor Family AT2G03340 48.868 3.26e-138 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr2g00130 WRKY 9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00130 - - gmx:100796679 700.279