Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00128 ATGGGTTGCATTAACTCTAAGAAGGCATTTGCCAGAGATTCACCTAAATATGTGCGTTCGGTATCGGCGGCAACCACCGATAAGAGGTCATCGGTTGCGGAGCCTCCTTCCAGAGTCCAATCTGGGGTTCTGACTTCTGAGACCAAAGCAGAACAACAACCATCGGAGGATCGGATACAGGACGGGAAGAAATTTAGGAAGAACAGTCCTAGAGGAACTGATTCTTTAAGAATTTCGCATAGGTTCGTGGAAGCGGAACAGAATGCCGCCGGATGGCCTCCTTGGCTCACCTCTGTTGCAGGGGAAGCTATTCAAGGATGGGTGCCTCGTAAGGCAGATTCATTTGAGAAATTAGACAAGATTGGACAAGGTACATATAGCAGTGTGTTCCGGGCACGGGAGGTTGAAACTGGGCGGATGGTTGCCCTGAAGAAGGTACACATTGAGAATTTTCATCCTGAGAGCATTAGGTTCATGGCAAGAGAAATAGCAATCCTACGCAGGTTTGACCACCCAAACGTCATGAAATTGGAAGGTATAATTACTTCACGGCTCTCAAGTAGCATATACCTTGTTTTTGAGTACATGGAACACGACCTTGCTGGCCTAGTATCCTCTCCAGACATCAAGTTCAGTGAGACTCAGGTTAAATGTTACATGAGGCAATTGTTAAGTGGACTTGAACACTGCCACATTCTTGGAGTTATGCACCGTGACATCAAAACATCCAATATATTGGTAAATAATGAGGGTGTTCTCAAGATAGGAGATTTTGGTTTAGCAAATACCCTTAACAACAACAAGCATCTTCTTACCAGCTGTGTGGTGACTCTATGGTATCGTCCTCCTGAACTTCTGATGGGATCAACAAACTATGGTGTATCAGTGGATCTATGGAGTGCGGGCTGTGTATTTGCAGAACTTTTTCTGGGAAAGCCTCTTCTTAAGGGGAGGACTGAAGTTGAACAATTACACAAAATATTTAAACTTTGTGGCTCTCCACCTGATGAATTTTGGAAAAAGTCTAAGCTTCCTCTTGCTACAATGTTTAAACCTCAGACTCATTATGAATGCTCTCTGAGGGAGCATTGTAAAGACATTCCAGCTTCGGCTGTAAACTTGATTGAGACTTTACTTTCCCTTGACCCAAGTGGACGTGGGACTGCTTCCTCTGCCCTAATGTCTGAGTATTTCAGCACCAAGCCGTATGCTTGTGATCCATCAATGCTGCCAAAGTATCCACCTCGCAAAGAAATGGATGTCAGGAATTGGGAAGAAGCACATAGGAGAAAAGCTGGCGGTAAAGTGCAAGAGGCTGCAAAACCAAGAAAACAAATGCGAGTCCATAAAGTTTTGCAAGAACCAACAGATGTCAATAATTCGGCTCCAAGAAAAGAGGAAATGCAGAACGTCTCTCAAAATGCTCGTAAAGATGATGGAAAAATGCATCTTCCTAAGGAAAAAGGAGGAGCTAAGCATACAGGGGCATCAAAGCCATCATCAAATGCAACGTCAGGAGCTACACGCGTATTAATGGATGCATCTCAAGGCTTTAGTGTACCAATGCAAGTCCCAGGATCCAATGGCTTTAATTGGAGCAAAAACAGAAAAGGAGATGCTGCATCTACTTTGTCAGATGGCTCAAAAAGCAAAATTAGTGCACTTGATCCATCATTTGCAAAAGGAACCTATGACTTAACCAAACGAAGCACAGATTTATCAGAAAGAAAATATATTGGTAATGCAAGCCATCATAACAAAACTTACAACAACCATCGACAACAAAAGCATCAGATTCATGCTGCACCAGACTCTCTTAGTGAAGCTGATGAATACAATTATACAGATGTTGATCCATCAGAACAAACAAATATTGTGATAAATCCTCAGAGCCACAGAAAGCAAGGTGACCCCCCTGAATTATCAGGACCCCAAGTATCTAGACCAAATAGAATCATTGAGTCGTCACAAAGGAATGAAAATGGTATTTCTCGATCAACTCGAAAATCAAGACTAGGAAGAGACAAATGA 2031 0.4284 MGCINSKKAFARDSPKYVRSVSAATTDKRSSVAEPPSRVQSGVLTSETKAEQQPSEDRIQDGKKFRKNSPRGTDSLRISHRFVEAEQNAAGWPPWLTSVAGEAIQGWVPRKADSFEKLDKIGQGTYSSVFRAREVETGRMVALKKVHIENFHPESIRFMAREIAILRRFDHPNVMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSSPDIKFSETQVKCYMRQLLSGLEHCHILGVMHRDIKTSNILVNNEGVLKIGDFGLANTLNNNKHLLTSCVVTLWYRPPELLMGSTNYGVSVDLWSAGCVFAELFLGKPLLKGRTEVEQLHKIFKLCGSPPDEFWKKSKLPLATMFKPQTHYECSLREHCKDIPASAVNLIETLLSLDPSGRGTASSALMSEYFSTKPYACDPSMLPKYPPRKEMDVRNWEEAHRRKAGGKVQEAAKPRKQMRVHKVLQEPTDVNNSAPRKEEMQNVSQNARKDDGKMHLPKEKGGAKHTGASKPSSNATSGATRVLMDASQGFSVPMQVPGSNGFNWSKNRKGDAASTLSDGSKSKISALDPSFAKGTYDLTKRSTDLSERKYIGNASHHNKTYNNHRQQKHQIHAAPDSLSEADEYNYTDVDPSEQTNIVINPQSHRKQGDPPELSGPQVSRPNRIIESSQRNENGISRSTRKSRLGRDK 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00128 676 MobiDBLite consensus disorder prediction 470 493 - -
Accr2g00128 676 SMART serkin_6 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00128 676 MobiDBLite consensus disorder prediction 1 73 - -
Accr2g00128 676 MobiDBLite consensus disorder prediction 426 451 - -
Accr2g00128 676 Gene3D Phosphorylase Kinase; domain 1 102 197 - -
Accr2g00128 676 Pfam Protein kinase domain 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00128 676 MobiDBLite consensus disorder prediction 19 50 - -
Accr2g00128 676 MobiDBLite consensus disorder prediction 426 504 - -
Accr2g00128 676 PANTHER CELL DIVISION PROTEIN KINASE 113 402 - -
Accr2g00128 676 ProSiteProfiles Protein kinase domain profile. 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00128 676 MobiDBLite consensus disorder prediction 614 676 - -
Accr2g00128 676 FunFam probable serine/threonine-protein kinase At1g54610 198 438 - -
Accr2g00128 676 FunFam probable serine/threonine-protein kinase At1g54610 102 197 - -
Accr2g00128 676 MobiDBLite consensus disorder prediction 616 631 - -
Accr2g00128 676 MobiDBLite consensus disorder prediction 648 663 - -
Accr2g00128 676 MobiDBLite consensus disorder prediction 527 555 - -
Accr2g00128 676 MobiDBLite consensus disorder prediction 454 469 - -
Accr2g00128 676 Gene3D Transferase(Phosphotransferase) domain 1 198 438 - -
Accr2g00128 676 MobiDBLite consensus disorder prediction 51 73 - -
Accr2g00128 676 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Accr2g00128 676 SUPERFAMILY Protein kinase-like (PK-like) 109 404 IPR011009 -
Accr2g00128 676 MobiDBLite consensus disorder prediction 527 552 - -
Accr2g00128 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Accr2g00128 676 CDD STKc_CDK9_like 115 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00128 Accr-Chr2 4122887 4127130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00128 107 453 Core Cell Cycle Gene Families AT5G10270 44.904 6.98e-103 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr2g00128 Pkinase 5.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00128 - - lja:Lj1g3v2982400.1 816.994