Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00125 ATGGAAAACACCGAACAAGCAAACTTTTCTGAGTTATTGTCTGAGCTACTAGGTATGGCTGATGAAGTTGCTTCCACTGCTCAGAACTGTGAAATTGAAAAGAATGTTTTTGCTGAGTTTTCCATATTAGTAGAGGAATTTGCACCAATCTTCAGTGATTTGAGAGACAAAAGCACGGTCATGGACAAGCCGCCTATTAGAAAATCGTTGGAATCTCTCAAGAATGAGCTTAGGCGTGCTAAGGCTTTGACAAAAAGCCTTAATCAGAAACATCTTATTAAACAGATAGAGGACATAACTCATGATCTTGGTCGATCATTGGGGCTGCTTCTTGTGTCCAGCCTTGAAGTGTCCACTGATTCTAGAGAAAAGATTTGTACATTGCAGAGAAAGTTGATGGGTGCAAGATTTGGTGGAAATATAAGTTCAACTTCCAGTCCAAGATCAGAGTTTGTCAGTGATGTGAAGCTTGAAGGGGAAATAGAAGAAGAAATAGTGGAATTCGCTATTGGCGATGTTATATTGCAACTTAAACATGGTAATGATGAAGAATTCACAGTAGCACTTTTGAGACTAAAGGGGTTCATGAGAGATGAAAAAGCAGATTATGATTTAATTAATGAAGAAGCGCTTGTTGCCATTCTGATGAATCGACTAGGTTCAAGTAAGGCTGACAATAGGCTGACCATCCTTCAATTACTAAGAAGCATTGCTTTTGGCAATGATGAAAAGAAGGAGAAGATGGCAGATATCAAGTTTTTATCAACTGTGGTGAAGTCTCTTTCGAGAGAAGCAGAAGAAAGGAGAGAAGCAGTGGGGCTTTTACTGGACCTCTCTAACCTCCCTATAGTTAAGCGACGAATAGGAAGAATTCAAGGGTGTATTGTTATGCTGGTCTCTATTCTTAATGGAGATGATCCTGTTGCTTCACATGATTCAGCAAAGTTGTTGGATATATTGTCTAGTAATTCTCAAAATGCTCTTCACATGGCAGAGGCCGGTTACTTTAAGCCACTAGTGCAGTGTTTGAAGGAAGGGTCTGACATGACCAAGATCCTCATGGCAACAGCACTGTCGAGATTGGAGCTCACTGATCACAGCAAATTCACACTTGGAGAAGATGGGGTGATTGAGCCTCTAGTCAAAATGTTTACTTCTGGGAATCTTGAGTCCAAGTTGTCAGCTCTAAATGCACTGCAAAATTTGTCGAGCTTGACAGAAAATGCACAGCGTTTGATCAGATCAGGAATTGTGGTATCTCTGCTACAACTTCTTTTCTCTGTGACATCTGTGCTCATGACTCTTCGGGAGCCTGTATCAGCTATTCTAGCAAGAATTGCTCGGTCAGAGCCCTTGCTTATTAATCCAGAGGCAGCTCAGCAGATGCTCTCACTTTTGAACCTTTCCAGCCCAATAATTCAGATTCATCTACTAGAAGCACTAGATAGCATTGCTGCTCATCCGGGTGCCTCAAAAGTGAGGAAAAAAATGAAGGAAAAAGGTGCACTTCAGCTTCTTTTACCTTTCCTGATGGAAACAAACACTGAAATCCAGAGCAAGGCGTTGCAATTTCTGTATACTCTCTCCAAAGATCTAACAGAAGAGTTGATAGAACATCTTGATGAAACCCATCTTTTCAATATTGTCAATATCATCTCATTATCAACATCTGAGAGTGAAAAGGCTGTTGCTGTTGGTTTACTGAGTAATCTTCCTGTTGGTGACAAGAAAGTGACAGATGCACTGAAGAGGGCAAATTTGCTCCCTATTTTAACATCCATTATGTCATCAAGCACAGGAAGTAATTCACCCACAAGTTTCTTAATGCAGAATGTTGTGGGTGTCATAATCCGGTTCACAAATCCTTCTGACAAAAAACTACAACTTCTCTCAGCAGAACACGGGGTAATCCCTTTGCTCGTAAAGCTTCTCTCATCCGGCTCACCAATCACAAAATCCAGGGCTGCAACATCACTTGCTCAATTATCCCAGAATTCTGTGTCTCTTGGGAGGTCTAGAAAATCAAGATGGTTTTGTGTTCCTCCCTCAGCAGATGCCCATTGTGAAGTTCATGACAGTAATTGCGTCGTGAAAAGCACATTTTGTTTGGTCAAAGCTGGCGCTGTCCCTCCGCTTATCCAAATATTAGAAGATAAAGAGAAGGAGGCCGTTGAAGCTGCTTTGATTGCCCTCTCAACTCTATTACAAGATGAAATATGGGAAGGTGGTGTGAACTGCATAGCTAAATCCTCAGGTGTTCAGGCTATTATAAAAATTTTAGAAGTGGGGGATGTAAAGATCCAAGAGAAAGCACTTTGGATGTTGGAGAGGATATTCAGGGTTGAAGAACACAGGGTTAATTTTTTAGAATCTGCTCAGGTTGTTCTCATTGATCTGGCTCAGAAGAGTGATTCTAGAATGAAGTCAGCTGTTGCAAAAGTATTAGCTGAGCTAGATCTCTTGCAATATCAATCAAGTTACTTCTAG 2487 0.4093 MENTEQANFSELLSELLGMADEVASTAQNCEIEKNVFAEFSILVEEFAPIFSDLRDKSTVMDKPPIRKSLESLKNELRRAKALTKSLNQKHLIKQIEDITHDLGRSLGLLLVSSLEVSTDSREKICTLQRKLMGARFGGNISSTSSPRSEFVSDVKLEGEIEEEIVEFAIGDVILQLKHGNDEEFTVALLRLKGFMRDEKADYDLINEEALVAILMNRLGSSKADNRLTILQLLRSIAFGNDEKKEKMADIKFLSTVVKSLSREAEERREAVGLLLDLSNLPIVKRRIGRIQGCIVMLVSILNGDDPVASHDSAKLLDILSSNSQNALHMAEAGYFKPLVQCLKEGSDMTKILMATALSRLELTDHSKFTLGEDGVIEPLVKMFTSGNLESKLSALNALQNLSSLTENAQRLIRSGIVVSLLQLLFSVTSVLMTLREPVSAILARIARSEPLLINPEAAQQMLSLLNLSSPIIQIHLLEALDSIAAHPGASKVRKKMKEKGALQLLLPFLMETNTEIQSKALQFLYTLSKDLTEELIEHLDETHLFNIVNIISLSTSESEKAVAVGLLSNLPVGDKKVTDALKRANLLPILTSIMSSSTGSNSPTSFLMQNVVGVIIRFTNPSDKKLQLLSAEHGVIPLLVKLLSSGSPITKSRAATSLAQLSQNSVSLGRSRKSRWFCVPPSADAHCEVHDSNCVVKSTFCLVKAGAVPPLIQILEDKEKEAVEAALIALSTLLQDEIWEGGVNCIAKSSGVQAIIKILEVGDVKIQEKALWMLERIFRVEEHRVNFLESAQVVLIDLAQKSDSRMKSAVAKVLAELDLLQYQSSYF 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00125 828 Gene3D - 314 674 IPR011989 -
Accr2g00125 828 Gene3D - 9 101 IPR036537 GO:0007166
Accr2g00125 828 Gene3D - 186 308 IPR011989 -
Accr2g00125 828 Gene3D - 686 824 IPR011989 -
Accr2g00125 828 SMART arm_5 405 448 IPR000225 GO:0005515
Accr2g00125 828 SMART arm_5 695 736 IPR000225 GO:0005515
Accr2g00125 828 SMART arm_5 241 280 IPR000225 GO:0005515
Accr2g00125 828 SMART arm_5 323 363 IPR000225 GO:0005515
Accr2g00125 828 SMART arm_5 624 664 IPR000225 GO:0005515
Accr2g00125 828 SMART arm_5 364 404 IPR000225 GO:0005515
Accr2g00125 828 SMART arm_5 740 780 IPR000225 GO:0005515
Accr2g00125 828 SMART arm_5 490 530 IPR000225 GO:0005515
Accr2g00125 828 SUPERFAMILY ARM repeat 143 427 IPR016024 -
Accr2g00125 828 SUPERFAMILY ARM repeat 371 783 IPR016024 -
Accr2g00125 828 Coils Coil 70 90 - -
Accr2g00125 828 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 164 828 - -
Accr2g00125 828 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 375 417 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00125 Accr-Chr2 4106296 4109374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00125 180 828 U-box Gene Family AT1G20780 29.738 1.05e-50 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00125 K08332 - gmx:100791453 1146.72