Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00122 ATGGCCAGGAAGAGAAAGAACATCAGTACTCTTCAAGAAGCAGGGGAAGATAAGAGTACTGGCAGTGAGGGAAGCATGGGGTGGGAGGAGATGGTGAAGGAGGCTGCCGTACTGGGAGGTCTCCGGCGAGCCCACAAGCGATTCGTGGGGGTCCGGCAGCGCCCTTCGGGTCGGTGGGTGGCGGAGATAAAAGACACCATACAGAAGATAAGAGTGTGGCTTGGCACTTTTGACACTGCAGAAGAAGCAGCCAGAGCCTATGATGAAGCTGCTTGCTTGCTTAGAGGAGCCAACACCAGAACAAATTTCTGGCCTTGTCAATCTCAATCCAATTCTTCAAACCCTGCTCTTTCTTCAAAAATCACCAATCTTCTCCTTCAAAGACTCCAAGAAAGAAACAACCAAAACCATAACTTATTACCTTCTTCCCTCTCCTCCTCTGTTTCTTCCCTGCTTGTAAGTCAGCAACAGAACCAAGAAGCAGAGGAAAAAACAGATGTTTCAATGGATCAGTTCACTGATTTTCTTAATGATCCTGAGGATTACATAACATCAAGCAACAACAGTGAACAAATAGATTACATTACTCGTAGTTTCGAGTCATGTTTGACTGAGAACAACGAGTGCAAGGAAAGAGAAGAGATAATCAGCGATTCAGGTGGGGAAAAAGAGGAAGAAAGCAGTATGGAGGATGTGATGGGGATGCAGGATTTTGAGTTTCTGGACCGTGTGATGCCATCATCATGGCACAACTATTCGCCATTCGAGATGCCTCGAGAAATGAAGCAGGAGGAAGATGACGAAGAGGGAGAGAACTATGGTGGTGATGAGCCTTGTACGCTGAGAGAAGCCATGAAAAGGATGAAGTATGAGAGGAAGTTCTCTGCTTCTCTCTATGCCTTCAATGGGATATCAGAATGCTTGAATTTGAAACTTGGATCCTCAAACTTGAAGGGAAGAACAGTTTCTGAGCAGCTATCTAGTCTCCAAATGGCATGTTCCCGTAAGAACAGAGTTGAGAATAACAACATCAACACCAAAGAAGAAGAAGAAAGCCCACGAGCGTCAATCGATATTTCTGAGTCCCCTTCTTCTTCTTCTGGTAATGATGGTGAATTGATTTGGAGTTCAATAGATCTTCCTCCAATTGCTTTGTTAGCTAATTACTGA 1170 0.4487 MARKRKNISTLQEAGEDKSTGSEGSMGWEEMVKEAAVLGGLRRAHKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCQSQSNSSNPALSSKITNLLLQRLQERNNQNHNLLPSSLSSSVSSLLVSQQQNQEAEEKTDVSMDQFTDFLNDPEDYITSSNNSEQIDYITRSFESCLTENNECKEREEIISDSGGEKEEESSMEDVMGMQDFEFLDRVMPSSWHNYSPFEMPREMKQEEDDEEGENYGGDEPCTLREAMKRMKYERKFSASLYAFNGISECLNLKLGSSNLKGRTVSEQLSSLQMACSRKNRVENNNINTKEEEESPRASIDISESPSSSSGNDGELIWSSIDLPPIALLANY 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00122 389 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 27 297 - -
Accr2g00122 389 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Accr2g00122 389 MobiDBLite consensus disorder prediction 341 356 - -
Accr2g00122 389 Pfam AP2 domain 47 96 IPR001471 GO:0003700|GO:0006355
Accr2g00122 389 SUPERFAMILY DNA-binding domain 47 104 IPR016177 GO:0003677
Accr2g00122 389 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Accr2g00122 389 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Accr2g00122 389 FunFam ethylene-responsive transcription factor RAP2-11 46 105 - -
Accr2g00122 389 MobiDBLite consensus disorder prediction 1 26 - -
Accr2g00122 389 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Accr2g00122 389 MobiDBLite consensus disorder prediction 357 371 - -
Accr2g00122 389 MobiDBLite consensus disorder prediction 339 371 - -
Accr2g00122 389 Gene3D AP2/ERF domain 46 104 IPR036955 GO:0003700|GO:0006355
Accr2g00122 389 CDD AP2 46 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00122 Accr-Chr2 4078945 4080114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00122 47 125 AP2-EREBP Transcription Factor Family AT5G19790 74.684 6.79e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g00122 AP2 7.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00122 K09286 - gmx:100790398 377.867