Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00064 ATGGGAAGCACTGAAGGGATTGAAGGAGAGCGTTTAGAAGATGTTGGATTGAAAGAGACTGTTTATGTTGCAGTGGGGAAGAATATAGAAAAGAGCCGACAGCTTCTGCTCTGGGCAGTGCATAATTGTTTTGAGAAGAAGATATGCGTGCTTCATGTTCATCGGCCTGAGCGTATTAATTATTTGAACAGAAAACTCAACGGGATTGAACCAGAAGACAATCAAATAAAGGCATTTCAGGAACAGGAGAGACAAAAAGTGCATAAACTTTTAGACCAATATGTTCTCACTGTTACTCTGGCAGGGGTGGAGGCCAATAAAATATTGATTAAAATGGACAGTATTGAGAAAGGAATTCTACATGCTATTGCTGAACACAATATCAAATGGCTGGTCATGGGAACATCAGGAGATATATATCGATCAGATAAACTGGCAGAGGAAGGGTCCAAGAAAGCTGTTCTCGTGTTTGAGCAAGCATCAGTATCCTGTAATATTTGGTTCATTCACAAGGGCAACCTCATATATAAAAGTGCAGATAGTAAAGATATATCTGAAATTGAGACTGCCCCATCATTGTCGGTGCTTGTTTCAAATACAGGAGGCAAACAATATGAGATCAGTTCTGAATATACTCCTAGTTCACAGAAATATTTAGATGCTGAAAAAATGGAAGGAATTCTTATAAATTTTAGTTCCCGTTGTTCTGAAGAATCAGTAAAATCAAGTACTAAGTTGACAGATTTGCCTTCTCTTGAGGTGGGAAGTGATGCACAGGATGACACAAGAGAGCAGGATGGAAGACGAGAACTAGCTAATGTGGATGCTAGGAGCTTCAGATCAAATGAACTTGTAGGGGCAGTGGAGAGCAGCAATATAGAAGACAACAGTACTGTGGAAGAATCAGAAAGCTTGTGTGCTAATGAGATAAGTAGAAGAAGAGAGCTTGAAGAATTATATGCTAGGGAAAAGCTAGAATTACAAAAAGTGAAAGAACAACAAGATGAAATAATGGGAAAACTACGAATGATCCAAGATCAAAATTCAGCACTTGAAGGCCAAGTTGTTGAGTCCAAGATTATGGCAGCAGAGTTGGAGGAGAAAATTTTATCAGCAGTGGAACTCTTGATAAGCTTCAAAGACAAACGAGATAAGTTAAAGATTGAGCATTTGAATGCTGCAAGGGAATTGAACAAGTTGAGGAATTTTGTAAACGCAGATGCGGAATATTCTCATGGAACAAAATTTCCGACGTTTTCATTCTTAAAGATTAATGAGGCAACTAATGATTTTGATCCATCCTGGAAGATTGGAGAGGGAAGGTATGGGAGTGTATATAAAGGATTGCTTCACAATATGCAAGTTGCCATAAGGATGTTGCCCTCTTATGGCTGTCAGAGCCTACCGGAGTTCCAACATCAGGTTGAGGTTTTGAGTAGGGTAAGACATCGAAACCTCATAACACTGATTGGAAGCTGCCCAGAATCTAGGTCACTTATCTATGATTACCGTAATAATGGCAGCCTTGAGGACCACCTTGCCCGCAAGGACAAGACCCCACTTCCTTGGCAAATTCGAATATCCATTGCTGCTGACATATGCTCTGCTCTTATCTTCATTCATTCCTGTGAGCCTTGTATAATCCATGGGAATTTGAAGCCCAGTAAAATCCTGCTTGATGTAAACTTCGTGGCCAAACTTTGTGATTTTGGCTTTTCTTCTTTGGTCCAGTTCAGTGGGCATCCAGCTGACAGTGACAAAACAGTTGATAAACGAAATGAAAGTTTGGTGTATGCGGATCCAGAATTTTTAACCACTGGGAAGCTCACACCAGAATCTGATGTGTATTCGTTTGGAATCATATTGTTACAACTTTTAACTGGCAGACCCCTTTCAGGAATAGTAAGGGATACAAAATGTGCGTTGGAGAAGGAAAATCTTAAAGCGGTATTGGACATTTCCGCTGGAGAATGGCCACTTTATCAAGTTGAACAGCTAGCGTATTTGGCACTGAGGTGTTCTGAGAAGACTCAGATGAACCGGCCTGATCTCTTGTCAGAAATCTGGAGTCTTCTTCAACCATTGCAATCTTCATGCAGTAACATGTCACCATATTCAACTTCGAAGAAGCTTCAACGTCCTCCTTCTCACTTTGTCTGCCCCATATTTCAGGAGGTCATGAAGGATCCTTACATAGCTGCTGATGGCTTTACATATGAAGAAGACGCGATAAGAGGTTGGTTGGATAGTGGTCACAACACTTCACCAATGACAAACCTCAAGCTTGAACACACCAACCTGGTGCCTAATTATGCATTACTTAATGCGATTCAGGAGTGGCAGCACCTGCAATGA 2355 0.4076 MGSTEGIEGERLEDVGLKETVYVAVGKNIEKSRQLLLWAVHNCFEKKICVLHVHRPERINYLNRKLNGIEPEDNQIKAFQEQERQKVHKLLDQYVLTVTLAGVEANKILIKMDSIEKGILHAIAEHNIKWLVMGTSGDIYRSDKLAEEGSKKAVLVFEQASVSCNIWFIHKGNLIYKSADSKDISEIETAPSLSVLVSNTGGKQYEISSEYTPSSQKYLDAEKMEGILINFSSRCSEESVKSSTKLTDLPSLEVGSDAQDDTREQDGRRELANVDARSFRSNELVGAVESSNIEDNSTVEESESLCANEISRRRELEELYAREKLELQKVKEQQDEIMGKLRMIQDQNSALEGQVVESKIMAAELEEKILSAVELLISFKDKRDKLKIEHLNAARELNKLRNFVNADAEYSHGTKFPTFSFLKINEATNDFDPSWKIGEGRYGSVYKGLLHNMQVAIRMLPSYGCQSLPEFQHQVEVLSRVRHRNLITLIGSCPESRSLIYDYRNNGSLEDHLARKDKTPLPWQIRISIAADICSALIFIHSCEPCIIHGNLKPSKILLDVNFVAKLCDFGFSSLVQFSGHPADSDKTVDKRNESLVYADPEFLTTGKLTPESDVYSFGIILLQLLTGRPLSGIVRDTKCALEKENLKAVLDISAGEWPLYQVEQLAYLALRCSEKTQMNRPDLLSEIWSLLQPLQSSCSNMSPYSTSKKLQRPPSHFVCPIFQEVMKDPYIAADGFTYEEDAIRGWLDSGHNTSPMTNLKLEHTNLVPNYALLNAIQEWQHLQ 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00064 784 Gene3D Phosphorylase Kinase; domain 1 402 503 - -
Accr2g00064 784 ProSiteProfiles Protein kinase domain profile. 431 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00064 784 SUPERFAMILY RING/U-box 705 781 - -
Accr2g00064 784 ProSiteProfiles U-box domain profile. 713 784 IPR003613 GO:0004842|GO:0016567
Accr2g00064 784 SMART Ubox_2 717 780 IPR003613 GO:0004842|GO:0016567
Accr2g00064 784 PANTHER OS02G0152300 PROTEIN 20 779 - -
Accr2g00064 784 Coils Coil 313 336 - -
Accr2g00064 784 CDD RING-Ubox_WDSUB1-like 715 770 - -
Accr2g00064 784 Gene3D Transferase(Phosphotransferase) domain 1 505 701 - -
Accr2g00064 784 Pfam Protein tyrosine and serine/threonine kinase 436 684 IPR001245 GO:0004672|GO:0006468
Accr2g00064 784 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 713 784 IPR013083 -
Accr2g00064 784 Pfam U-box domain 715 781 IPR003613 GO:0004842|GO:0016567
Accr2g00064 784 Gene3D HUPs 13 138 IPR014729 -
Accr2g00064 784 MobiDBLite consensus disorder prediction 246 266 - -
Accr2g00064 784 SUPERFAMILY Protein kinase-like (PK-like) 410 690 IPR011009 -
Accr2g00064 784 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 32 137 - -
Accr2g00064 784 Coils Coil 348 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00064 Accr-Chr2 2601421 2632395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00064 63 782 U-box Gene Family AT3G49060 44.444 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Accr2g00064 PK_Tyr_Ser-Thr 3.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00064 - - pcin:129304798 1222.22