Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00053 ATGATTGAGAAACTTTCAGGGCCAGTATTGGTACTCGGTTCCCAGATATTAGATTCAAAAGATGAATGCTCGGAAGTTGATGAAAGGCTTGCAACATTATTTCCTTACAACGTTAAGATTATACCACCTGAAGATGATATTAGTCGTGGAAACTGGAAGGCCCAACTGGAAGAGAACATGAAAATTATTCAGTTTCAAGATAGCAAAAAACACATTGCTGAAGTACTTGCGGCAAATGATATTGAATGTAACGACTTGAATTCAATCTACCGTGCAGACACAACGGTACCAAGTAAGTATATTGAAGAAATTGTGCTATCTGCAATACATCACCACTTGATAAATACCAAGGATCCAGAATACCGAAATGGGAAGCTAGTAATATCATCCGAGAGTTTGTCCCATGGTCTGAATCTGTTTCAAGAAGTAAATAGTACTGTTGAGGATACCCTGAAGCTGGAGACTAATGGAAACAAAGACTCAGCTGGCAGAGAGTGTAATGGTGCAAAACATGAGGAAGTTCCTCCTGACAATGAGTTTGAGAAGCGCATCAGACCAGAGGTCATCTCTGCAAATGAGATCGGAGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTAGTCATGCTTCCCCTTCGAAGGCCATATCTCTTCAGAGGTGGACTTCTTAAGCCTTGCAGAGGTATATTACTCTTTGGACCTCCAGGTACCGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGCTTTGTCAATGTCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGATGAGAAAAATGTCCGAGCTCTCTTCACATTGGCAGCAAAGGTTGCCCCAACTATTATTTTTGTTGATGAGGTTGACAGCATGCTCGGGCAGCGCACAAGAGTTGGAGAACATGAGACTATGAGGAAGATTAAAAATGAATTCATGATGCACTGGGATGGTCTATTCACAAAACCAGCGGAGCAAATTCTTGTCCTTGCTGCAACAAACAGGCCATTTGACCTTGATGAAGCAATCATACGGCGGTTTGAGCGAAGAATCATGGTCGGCCTTCCATCTGTTGAGAACAGGGAAATGATCTTGACGACTCTACTGGCTAAGGAAAAGACTGAAAATTTAGACTTAAAAGAGCTTGCTGCCATGACAGAAGGATACAGTGGAAGTGATCTTAAGAATTTGTGCACAACTGCTGCTTATCGACCTGTTAGGGAGTTCATAAAGCAGGAGAAATTGAAAAATATGGAAAAGAATAAAAAAGTGGCAGAAGAACAAAGCTCAGAGGATGCTTCAGATGCTATGGAGGGTGGAGAAGGGCAAGTAATTATCTTGAGGGCTTTAAACATGGAAGACATGACACAGGCTAAGAGTCAGGTTGCTGCAAGTTTTGCTGCTGAAGGATCAATAATGGCTGAGCTGAAGCAGTGGAATGAGCTATATGGAGAAGGAGGTTCAAGAAAGAAGCAGCAACTCACTTACTTCCTTTAG 1533 0.4168 MIEKLSGPVLVLGSQILDSKDECSEVDERLATLFPYNVKIIPPEDDISRGNWKAQLEENMKIIQFQDSKKHIAEVLAANDIECNDLNSIYRADTTVPSKYIEEIVLSAIHHHLINTKDPEYRNGKLVISSESLSHGLNLFQEVNSTVEDTLKLETNGNKDSAGRECNGAKHEEVPPDNEFEKRIRPEVISANEIGVTFADIGALDEIKESLQELVMLPLRRPYLFRGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFVNVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHETMRKIKNEFMMHWDGLFTKPAEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILTTLLAKEKTENLDLKELAAMTEGYSGSDLKNLCTTAAYRPVREFIKQEKLKNMEKNKKVAEEQSSEDASDAMEGGEGQVIILRALNMEDMTQAKSQVAASFAAEGSIMAELKQWNELYGEGGSRKKQQLTYFL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00053 510 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 509 - -
Accr2g00053 510 Gene3D - 195 367 IPR027417 -
Accr2g00053 510 Pfam ATPase family associated with various cellular activities (AAA) 236 366 IPR003959 GO:0005524|GO:0016887
Accr2g00053 510 ProSitePatterns AAA-protein family signature. 339 358 IPR003960 GO:0005524|GO:0016887
Accr2g00053 510 SMART AAA_5 232 369 IPR003593 GO:0016887
Accr2g00053 510 Gene3D - 368 450 - -
Accr2g00053 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 415 IPR027417 -
Accr2g00053 510 MobiDBLite consensus disorder prediction 155 176 - -
Accr2g00053 510 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 195 370 - -
Accr2g00053 510 Pfam AAA+ lid domain 388 431 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00053 Accr-Chr2 1979811 1983259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00053 196 427 Calmodulin-binding Proteins AT3G56690 38.136 1.97e-42 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00053 - - aew:130761723 783.482