Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00039 ATGCAGAAGCTCCCTAGCTTTGTCGTCAATGGAGGCATCAAGCTTCCCATTGGCTACTATTTTTGTCCCACCGATGAAGAGTTTGTCATTCACTACCTCAATAGGAAGGCCTTCTCTCACCCCTTGCCCGCCTCTGTCATCCCCGACGTCAACGTCTTCGCGGCCCACCCCCGCCGCCTCCTAGGTCCCTCTTTCCCCCCAAATCTGTTTTTGCGGTCTCATTATTTTGGCAGAAGTCAGAATGTTTTAAGAATTAACAATGTCATTCCAAGACCTAATGATTTACTCCTTCTCTTGTTTGGGGATATGCCTAAATTGAATCCTAATGCTCTGTCAAAGAAAAGAGGTATTTCTTTAGCCATAGGAAGGACCGTATGGATAACAAGAGGCCTGCTGGTTCTGGGTACCGGAAAACTATAA 420 0.4667 MQKLPSFVVNGGIKLPIGYYFCPTDEEFVIHYLNRKAFSHPLPASVIPDVNVFAAHPRRLLGPSFPPNLFLRSHYFGRSQNVLRINNVIPRPNDLLLLLFGDMPKLNPNALSKKRGISLAIGRTVWITRGLLVLGTGKL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00039 139 PANTHER NAC TRANSCRIPTION FACTOR 56 15 69 - -
Accr2g00039 139 ProSiteProfiles NAC domain profile. 15 139 IPR003441 GO:0003677|GO:0006355
Accr2g00039 139 Gene3D NAC domain 24 86 IPR036093 GO:0003677|GO:0006355
Accr2g00039 139 SUPERFAMILY NAC domain 11 64 IPR036093 GO:0003677|GO:0006355
Accr2g00039 139 Pfam No apical meristem (NAM) protein 16 64 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00039 Accr-Chr2 1160301 1160720 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00039 7 80 NAC Transcription Factor Family AT5G13180 44.595 6.63e-13 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g00039 NAM 3.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00039 - - pper:18782200 90.1225