Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00032 ATGCAGAAGCTCCCTAGCTTTGTCGTCAATGGAGGCATCAACCTTCCCATTGGCTACTGTTTCTGTCCCACCAATGAAGAGCTTGTCATTCACTACCTCAATAGGAAGGCCTTCTCTCACCCCTTGCCCGCCTCCGTCATCTCCGACGACGACGTCTTCGCGGCCCACCCGCACCGCCTCCCAGATGTCGTTGATTCCAAAGAAATGAGGTATTTCTTTAGCCATAGAAAGGACCGTATGGACAACAAGAGGCCTGCTGGTTCTAGGTACCGGAAAACTATAAGCAATGACAAGCTCAAATTGTTGCTTTGGAGAGTAACCAAGTGGTTGGAATGA 336 0.5 MQKLPSFVVNGGINLPIGYCFCPTNEELVIHYLNRKAFSHPLPASVISDDDVFAAHPHRLPDVVDSKEMRYFFSHRKDRMDNKRPAGSRYRKTISNDKLKLLLWRVTKWLE 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00032 111 Gene3D NAC domain 24 108 IPR036093 GO:0003677|GO:0006355
Accr2g00032 111 Pfam No apical meristem (NAM) protein 16 91 IPR003441 GO:0003677|GO:0006355
Accr2g00032 111 SUPERFAMILY NAC domain 10 84 IPR036093 GO:0003677|GO:0006355
Accr2g00032 111 PANTHER NAC TRANSCRIPTION FACTOR 56 15 92 - -
Accr2g00032 111 ProSiteProfiles NAC domain profile. 15 111 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00032 Accr-Chr2 1006183 1006687 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00032 7 98 NAC Transcription Factor Family AT5G13180 45.833 4.50e-17 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g00032 NAM 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00032 - - pvy:116129932 106.686