Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00017 ATGCCCTCGGCTCAAGATCCATTCTACGTTGTGAAGGAAGAGATTCAAGAATCAATCGATAAGTTGCAATCTAGTTTTCAGCAATGGCAAAGTACTTCATCTGGTGCTGTAGAGCGGGTGAATCTTTCAAAGGAACTGCTTACTAGTTGCGAAAGCATTGAGTGGCAGGTAGATGAATTGGACAAAGCTATTGCTGTCGCAGCTAGAGATCCCTCTTGGTATGGTATTGATGAAACGGAGCTTGAAAATCGGAGGAGATGGACCAACAGTGCTCGTACCCAGGTGGGCGCAGTAAAGAAAGCAGTTGAGGCTGGAAAGAGATCAAATATGACAAGCCTTGATAATGTAGAAAGGCATCGAGAACTGATGAGGCTCCCCAATTCCCATCAAGCTGACACATCTAACCAGTATGCTGGCCATGATAATGATGATTTCATATCATCTGAATCTGATAGACAGCTGCTTCTAATAAAGCAACAAGATGAGGAGTTGGATGAGCTTAGTGCCAGTGTACAAAGAATTGGAGGTGTTGGGCTCACAATACATGAAGAACTCCTTGCACAGGAAAAGATTGTAGATGAACTGGGTGCTGAAATGGACAGTACATCAAATCGACTAGATTTTGTCCAGAAAAAGGTGGGCATGGTGATGAAGAAGGCTGGTGCGAAGGGCCAGATCATGATGATACTGGCTTTAGTGGCTCTGTTTATTTTCCTTTTTATTTTGGTATTTTTCACCTAG 741 0.4332 MPSAQDPFYVVKEEIQESIDKLQSSFQQWQSTSSGAVERVNLSKELLTSCESIEWQVDELDKAIAVAARDPSWYGIDETELENRRRWTNSARTQVGAVKKAVEAGKRSNMTSLDNVERHRELMRLPNSHQADTSNQYAGHDNDDFISSESDRQLLLIKQQDEELDELSASVQRIGGVGLTIHEELLAQEKIVDELGAEMDSTSNRLDFVQKKVGMVMKKAGAKGQIMMILALVALFIFLFILVFFT 246
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00017 246 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 154 216 IPR000727 -
Accr2g00017 246 FunFam syntaxin-61 isoform X1 157 218 - -
Accr2g00017 246 ProSitePatterns Syntaxin / epimorphin family signature. 160 199 IPR006012 GO:0005484|GO:0006886|GO:0016020
Accr2g00017 246 Pfam Syntaxin 6, N-terminal 6 99 IPR015260 GO:0016020|GO:0048193
Accr2g00017 246 FunFam Syntaxin 10 3 105 - -
Accr2g00017 246 Coils Coil 12 32 - -
Accr2g00017 246 SUPERFAMILY SNARE fusion complex 153 216 - -
Accr2g00017 246 SUPERFAMILY t-snare proteins 5 102 IPR010989 GO:0016020|GO:0016192
Accr2g00017 246 CDD SNARE_NTD_AtSYP61-like 5 103 - -
Accr2g00017 246 PANTHER SYNTAXIN 13 237 IPR045242 -
Accr2g00017 246 CDD SNARE_Qc 157 213 - -
Accr2g00017 246 Gene3D - 161 225 - -
Accr2g00017 246 Coils Coil 192 212 - -
Accr2g00017 246 Pfam SNARE domain 191 242 IPR000727 -
Accr2g00017 246 Gene3D - 2 105 - -
Accr2g00017 246 SMART tSNARE_6 149 216 IPR000727 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00017 56 246 SNARE and Associated Proteins AT1G28490 71.204 1.22e-94 274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00017 K08500 - zju:107433077 353.984