Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00001 ATGGGTGAAGAAGACTGGGATCTCTCTGCCGTGGTGCGAGGTTGCAGATCCTCCGCCGCCGCCGCCGCCGCGGCTACCAGCACCAATACTCCACCAGCGTCATCTTCTTCTTCTTCATCCAAGGGCGTTCCTTTACCATTAATCAAGCAAGAAAATGAGGTCTGCTCAATTCCCAGTTTGATTCAACCCACAACCAATGGGTTTCAAGAACTACAACGATTGCTCAGACCCTTTATCCCCACCACCACCACAACCACCACAACCACCACTATCTCTACTAGTGGTTGTGGCATCTATCCCAATTCCTCTTTCACTGATTTTGCAGTTCCAGGGTCCAGTAGTAATAATATTAATAATAACATAAATACTTCTGCATCATTTTCTTACGCGTCCAATACCAGGCCTCATTTTGTGCCACAAGCCTCACCCTCCACTAGTTCTCCTGGATTGCAAAGATTCCATGACCAACATGTACAGAAACTCCAAAAACAAAAGCAAATTCAAGATCAATTACAACAACTAGTTCATCAGAAAAAGCAATTTATAACACCGCCAGGTCAAATCAGCAGCGGCGGTAGTAATAATTCGGTTATGACTTTACCAAATACGCAAGCTGCTCAAGTAACAACCAGATCGAGAAAAAGAAAGAGTCAACAGAGAAGAATGGTTTGCCATGTAACAGCGGAAAACCTCACCGCAGATTCTTGGGCCTGGAGAAAATACGGTCAAAAGCCTATTAAAGGTTCTCCATATCCCAGGAACTATTATAGATGTAGCAGTTTAAAAGGTTGTGGGGCCCGGAAGCAAGTGGAACGAAGCAATACTGAAGCAGATATGTTCATCGTCACGTACACCGGAGAACATACGCATCCGCGACCTACCCATCGGAACTCGCTTGCCGGAAGTACTAGGAACAAACCGTCGTCTTTGACGACGACCCGTCAACCCGCCTCTCATGAATCTGGGTCACCAAGCACTAACGTGAACCGGGCATCGTCATCTTCACAGCGTTCCCCGACGACGCCTTTGACGGAGGTGGCGGCGAAAGACGAGTGCGCTGATGAACCCATTTTAAGCAATGAAGCCACGAGCCCTTTCCCTGAAGATGATTTAGACTTGGCCTCTCATGATGACATTTTGATACCAAACATGGCGGCCATGATGGATAAGTTCTTGCTGGGTGCTGATGAGCTTCACCTCGGAATTGGACTTAGTGGCGGTGGGGGTGATTGCACACGCAGCAATCCAGCGGATGGGTCGTATCCAAGTACTGACCCGGGTTGA 1284 0.479 MGEEDWDLSAVVRGCRSSAAAAAAATSTNTPPASSSSSSSKGVPLPLIKQENEVCSIPSLIQPTTNGFQELQRLLRPFIPTTTTTTTTTTISTSGCGIYPNSSFTDFAVPGSSSNNINNNINTSASFSYASNTRPHFVPQASPSTSSPGLQRFHDQHVQKLQKQKQIQDQLQQLVHQKKQFITPPGQISSGGSNNSVMTLPNTQAAQVTTRSRKRKSQQRRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRNYYRCSSLKGCGARKQVERSNTEADMFIVTYTGEHTHPRPTHRNSLAGSTRNKPSSLTTTRQPASHESGSPSTNVNRASSSSQRSPTTPLTEVAAKDECADEPILSNEATSPFPEDDLDLASHDDILIPNMAAMMDKFLLGADELHLGIGLSGGGGDCTRSNPADGSYPSTDPG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00001 427 Gene3D WRKY domain 217 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g00001 427 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 393 IPR044810 GO:0003700
Accr2g00001 427 MobiDBLite consensus disorder prediction 295 343 - -
Accr2g00001 427 SUPERFAMILY WRKY DNA-binding domain 226 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g00001 427 MobiDBLite consensus disorder prediction 406 427 - -
Accr2g00001 427 FunFam WRKY transcription factor 22 215 286 - -
Accr2g00001 427 Pfam WRKY DNA -binding domain 234 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00001 427 SMART WRKY_cls 232 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00001 427 MobiDBLite consensus disorder prediction 21 43 - -
Accr2g00001 427 ProSiteProfiles WRKY domain profile. 227 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00001 427 MobiDBLite consensus disorder prediction 284 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00001 Accr-Chr2 24195 25727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00001 211 343 WRKY Transcription Factor Family AT5G52830 67.669 1.24e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr2g00001 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00001 - - pcin:129285324 516.153