Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00110 ATGGCGGGTCGTAGAAGAAAGAGGCACCACTTTAGCAGAATACATGCGTTTGCGTGTGGGAAAGCTTCGTTTAGAGGGGAGCATTCGCTGATTGGAGGCCCTGGATTCTCCAGGATAGTGTTATGCAACGAACCAGAACGTGTGGAGGATTATGGCGATAATTACGTAAGAACTACTAAATATACACTAGCCTCCTTCCTACCAAAGTCGCTATTCGAGCAATTTAGGAGGGTTGCTAACTCCTATTTCCTCGTATGTGCCATCTTGTCCTTCTTCCCCGTTTCTCCTTATTCAGCTGTCAGCAATGTCGTTCCTCTGTTGCTTGTGGTTGCTGTAAGTATGGGGAAAGAAATGGTTGAAGACTGGAAACGCAAACAGCAGGATATTGAGATGAATAACAGAAAGGTCAAAGTACATTGCGGAGGAGGCGCTTTTGATCATTCTAAATGGAGGGATCTAAAAGTTGGAGACATAGTAAAGGTGGAAAAAGATGAATTTTTTCCCGCCGACCTCGTCTTACTTTCATCGAGTTATGATGATGCTGTTTGCTATGTTGAGACCATGAATCTTGACGGAGAAACAAATCTTAAGTTGAAACAAGCTCTGGAAGAAACTTCCACACTGCAAGAAGATTCAGGCTTTCAGAATTTCAAAGCAATGATCAAATGTGAAGATCCGAATGCAAATTTGTACTCCTTTGTGGGCACTCTGCAGCTTGAAGATCAACAGTACCCCCTTGCTCCTCAGCAGCTTCTTCTTAGGGACTCAAAGCTGAGGAATACCGATTTTATCTATGGTGTTGTAATCTTTACAGGTCATGATACAAAGGTTATGCAGAATTCAACAGACCCTCCTTCAAAGAGAAGCAAAATTGAGAAACGAATGGATAAGTTAATCTACTTCCTGTTCTTTGTCTTAATCATTATTTCTCTTATTGGATCCATTTTCTTTGGAATTTCAACTAGGCAAGACCTTGAAAATGGAAGAACAAAAAGATGGTACCGTAGACCAGATAATACTACAGTATACTATGATCCAAATCGAGCAGCAGTTGCAGCAATTTTGCATCTCTTGACTGCGCTTATGTTATATGGTTACTTGATTCCCATTTCCTTGTATGTTTCGATAGAAATAGTGAAAGTTCTTCAGAGCATATTCATTAACCAAGATGTGAACATGTATTATGACGAAACTGACAAGCCAGCTCACGCTCGTACGTCAAATTTGAATGAAGAACTTGGCCAAGTTTGTACCATACTTTCAGATAAAACAGGAACTTTAACCTGTAATTCTATGGAGTTCATCAAGTGTTCCATTGCCGGGGTTGCTTATGGTCGTGGAGTTACAGAAGTTGAGAGAGCTCTAGCTAGAAGAAAAGAATCTCCTTTATTACAAAATCTGACAGATGAGGATGATCATGTTGCAGGAAAGCCATCCATCAAAGGATTTAACTTTACAGATGAAAGGATCATGAACGGAAATTGGTTCAATGAGCCTCATGCAAATGAAATCCAGAACTTTCTGCGTTTGCTGGCTGTATGCCATACTGCAGTGCCTGAAGTTAACGAAGAAACAGGTAATGTCTCATATGAAGCAGAATCGCCAGATGAGGCAGCTTTTGTGATTGCTGCAAGGGAACTTGGATTTGAATTTTATGAAAGGACACAGACAGCAATTTTGATACGTGAGTTCAACCCCAAATCAAAAATGAAGGAGGAAAGATCCTACAAACTCTTAAACATAATAGAATTTAGCAGTGCAAGAAAGCGGATGTCTGTTATTGTCAGAGATGAGGAGGGGAAACTATTACTACTTTCCAAAGGTGCTGATAGTGTCATGTTTGAAAGACTTAGAAAGAATGGAAGGATGTTTGAAGAGAAGACTAAGAAGCATATTGACGAGTATGCTGATGCTGGTCTGAGGACGTTGTTACTGGCATATCGTACACTTGATGAGGAAGAATATAACCAATTTAACAAAGAATTCACAGAGGCCAAGAATTTGGTTAGTGCAGATCGGGAGCAGATTATAGAGGAAGTAGCAGAAAAGATTGAGAAGGATTTGATTCTTCTTGGTGCTACCGCAGTTGAGGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGTTAGCACAAGCTGGAATTAAACTATGGGTTTTGACCGGTGATAAGATGGAGACAGCAATCAATATTGGATTTGCTTGCAGTTTACTAAGGCAAGGAATGACGCAAATTATAATTAGCTCAGACACTCCGGAAATCAAATCACTGGAGAAAATGGAGGACAAGTCTGCTGCTGCAATGGCAATTAAGGCAAGTGTTGTTCGTCAGATAAAGGATGGGAAGGCATTGCTTTCTAAGTCAGATGAAAACTCTGAGGCATTAGCTCTAATCATCGATGGGAAGTCGCTTGCATATGCACTCCAGCATGATGTGAAGGACTTGTTCCTCGAACTTGCTGTTGGATGCGCATCGGTTATATGCTGTCGTTCATCTCCCAAACAGAAAGCTCTTGTCACAAGACTGGTGAAGACTAAAACTGGTAGTACAACTCTTGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATCGGAATTGGCATCAGCGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGCGATATCGTGATTGCCCAATTTCGTTTTCTTGAGCGCCTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATATCAAAAATGATTTGCTACTTCTTTTACAAGAATATTGCCTTCGGTTTCACTCTCTTTTTCTTTGAGGTGTATGCATCGTTCTCAGGGCAAGCAGCCTATAATGACTGGTTCCTGTCACTGTACAACGTATTCTTCACTTCACTTCCCGTGATTGCCTTGGGAGTGTTTGACCAGGATGTCTCTGACAGATTATGTCTCAAGTTTCCACTACTGTATCAAGAAGGCGTCCAAAATGTCCTATTCAGCTGGAAACGAATCCTGGGTTGGATTTTGAACGGCCTGTTGACTTCTGCCATCATCTTCTTCTTTTGTATCAAAGCGACAGAGCATCAAGCCTTCCGAAAGGGCGGGGAAGTTGCAGGTCTAGAAATCTTGGGAGCCACCATGTACACATGTGTTGTTTGGGTGGTCAACAGTCAGATGTCTATATCTGTAAGCTACTTCACATACATGCAGCATATATTCATATGGGGTGGCATTCTATTTTGCTACGTATTCCTCTTGGCATATGGAGCCATGGATCCCACCATTTCAACCACAGCCTATATGGTCTTCATTGAAGCTCTTGCTCCCTCCCCCTCATACTGGACCATCACTTTGCTTGTGCTTTTTTCCTGCCTTCTTCCATACTTCGCCATTTCTTCCTTCCAGATGAGGTTTTTCCCCATGTACCATCAAATGATACAGTGGATAAGAAATGACGGGCAAACCAGGGATCCTGAATTCTGTGATATGGTGAGACAGAGATCCATACGGCACACCACCGTTGGCTACACTGCTCGTTTTGAAGCATCCAAACGATTTGAAGACAAGCCTTATCAGCAGCGTTAA 3564 0.4189 MAGRRRKRHHFSRIHAFACGKASFRGEHSLIGGPGFSRIVLCNEPERVEDYGDNYVRTTKYTLASFLPKSLFEQFRRVANSYFLVCAILSFFPVSPYSAVSNVVPLLLVVAVSMGKEMVEDWKRKQQDIEMNNRKVKVHCGGGAFDHSKWRDLKVGDIVKVEKDEFFPADLVLLSSSYDDAVCYVETMNLDGETNLKLKQALEETSTLQEDSGFQNFKAMIKCEDPNANLYSFVGTLQLEDQQYPLAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDKLIYFLFFVLIIISLIGSIFFGISTRQDLENGRTKRWYRRPDNTTVYYDPNRAAVAAILHLLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDVNMYYDETDKPAHARTSNLNEELGQVCTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALARRKESPLLQNLTDEDDHVAGKPSIKGFNFTDERIMNGNWFNEPHANEIQNFLRLLAVCHTAVPEVNEETGNVSYEAESPDEAAFVIAARELGFEFYERTQTAILIREFNPKSKMKEERSYKLLNIIEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLRKNGRMFEEKTKKHIDEYADAGLRTLLLAYRTLDEEEYNQFNKEFTEAKNLVSADREQIIEEVAEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMTQIIISSDTPEIKSLEKMEDKSAAAMAIKASVVRQIKDGKALLSKSDENSEALALIIDGKSLAYALQHDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIVIAQFRFLERLLLVHGHWCYRRISKMICYFFYKNIAFGFTLFFFEVYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSDRLCLKFPLLYQEGVQNVLFSWKRILGWILNGLLTSAIIFFFCIKATEHQAFRKGGEVAGLEILGATMYTCVVWVVNSQMSISVSYFTYMQHIFIWGGILFCYVFLLAYGAMDPTISTTAYMVFIEALAPSPSYWTITLLVLFSCLLPYFAISSFQMRFFPMYHQMIQWIRNDGQTRDPEFCDMVRQRSIRHTTVGYTARFEASKRFEDKPYQQR 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00110 1187 Pfam E1-E2 ATPase 131 326 - -
Accr23g00110 1187 FunFam Phospholipid-transporting ATPase 112 282 - -
Accr23g00110 1187 Gene3D - 110 282 - -
Accr23g00110 1187 FunFam Phospholipid-transporting ATPase 533 691 - -
Accr23g00110 1187 ProSitePatterns E1-E2 ATPases phosphorylation site. 422 428 IPR018303 -
Accr23g00110 1187 PRINTS P-type cation-transporting ATPase superfamily signature 420 434 - -
Accr23g00110 1187 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Accr23g00110 1187 SUPERFAMILY HAD-like 418 910 IPR036412 -
Accr23g00110 1187 Pfam Phospholipid-translocating ATPase N-terminal 42 101 IPR032631 -
Accr23g00110 1187 Pfam Cation transport ATPase (P-type) 513 617 - -
Accr23g00110 1187 Gene3D - 687 895 IPR023214 -
Accr23g00110 1187 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Accr23g00110 1187 SUPERFAMILY Calcium ATPase, transduction domain A 142 280 IPR008250 -
Accr23g00110 1187 NCBIfam HAD-IC family P-type ATPase 822 938 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr23g00110 1187 Gene3D - 527 669 IPR023299 GO:0000166
Accr23g00110 1187 CDD P-type_ATPase_APLT_Dnf-like 53 1015 - -
Accr23g00110 1187 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 490 693 IPR023299 GO:0000166
Accr23g00110 1187 FunFam Phospholipid-transporting ATPase 691 895 - -
Accr23g00110 1187 SFLD C1.7: P-type atpase like 402 906 - -
Accr23g00110 1187 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1144 - -
Accr23g00110 1187 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1133 IPR023298 -
Accr23g00110 1187 NCBIfam phospholipid-translocating P-type ATPase 51 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Accr23g00110 1187 SFLD p-type atpase 402 906 IPR044492 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00110 10 1185 Primary Pumps ATPases AT3G25610 69.697 0.0 1751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00110 K01530 - gmx:100797039 1978.76