Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr23g00107 | ATGCTGAAAAAACAAACCCTTGCTTCTAATCTCATGGAAAACCTAGAGATCTCATCAGAATGTCCACTTCCCCCTCAAAACTCAAACAAAGGCCAATCTTCAGGTAATAAGCGCCATGAGAGAAAGTACCTAGGGGTGAGACAAAGGCCTTCAGGGAGGTGGGTGGCTGAGATTAAGGAATCGTCACAGAAGCTGAGGCTGTGGCTGGGAACTTTTGACAGAGCAGAAGATGCTGCCATGGCTTATGACTGTGCTGCTACGCTTCTCAGAGGAAGAAATGCCAAGACTAACTTCCACTCTCCTTCAGGCTCAGGGATGATCGCCAATACACGCAAGGAAATTTGCAGCTTTTTGCGTAAGAATCCAAGGGCTTACCACATTCTTAAGCATGCAATCATGAAAAACCATCATGCACTTGCTTCCTCCACAGCCTTGCCTTGGAACAACCAGACCAGTAACATTTCGAGAGACGGGTTCGAGACGCTTGTTGAAGAAACCATAGTTTGCTGTTCCACTACTAGTTCTGAACAAGCTTCTTCTTCTTCCTCTTCTGGGTGCTGTGGGGTCTCATTTGGTAGTTCTAAGGTTTATTCTTCTGTGGTTGTGGATCCATCTTTCAGCGCCTCGTTTTGTGGGGAAGAAACCCTGTAA | 651 | 0.4639 | MLKKQTLASNLMENLEISSECPLPPQNSNKGQSSGNKRHERKYLGVRQRPSGRWVAEIKESSQKLRLWLGTFDRAEDAAMAYDCAATLLRGRNAKTNFHSPSGSGMIANTRKEICSFLRKNPRAYHILKHAIMKNHHALASSTALPWNNQTSNISRDGFETLVEETIVCCSTTSSEQASSSSSSGCCGVSFGSSKVYSSVVVDPSFSASFCGEETL | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr23g00107 | 216 | Gene3D | AP2/ERF domain | 41 | 100 | IPR036955 | GO:0003700|GO:0006355 | |
Accr23g00107 | 216 | SMART | rav1_2 | 42 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Accr23g00107 | 216 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 30 | 165 | - | - | |
Accr23g00107 | 216 | PRINTS | Ethylene responsive element binding protein signature | 43 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Accr23g00107 | 216 | PRINTS | Ethylene responsive element binding protein signature | 65 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Accr23g00107 | 216 | Pfam | AP2 domain | 42 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Accr23g00107 | 216 | ProSiteProfiles | AP2/ERF domain profile. | 42 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Accr23g00107 | 216 | SUPERFAMILY | DNA-binding domain | 42 | 99 | IPR016177 | GO:0003677 | |
Accr23g00107 | 216 | MobiDBLite | consensus disorder prediction | 18 | 44 | - | - | |
Accr23g00107 | 216 | CDD | AP2 | 42 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Accr23g00107 | 216 | MobiDBLite | consensus disorder prediction | 18 | 33 | - | - | |
Accr23g00107 | 216 | FunFam | ethylene-responsive transcription factor RAP2-11 | 41 | 100 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr23g00107 | 25 | 111 | AP2-EREBP Transcription Factor Family | AT5G19790 | 56.180 | 8.29e-27 | 101 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Accr23g00107 | AP2 | 6e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr23g00107 | K09286 | - | gmx:100800716 | 216.853 |