Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00107 ATGCTGAAAAAACAAACCCTTGCTTCTAATCTCATGGAAAACCTAGAGATCTCATCAGAATGTCCACTTCCCCCTCAAAACTCAAACAAAGGCCAATCTTCAGGTAATAAGCGCCATGAGAGAAAGTACCTAGGGGTGAGACAAAGGCCTTCAGGGAGGTGGGTGGCTGAGATTAAGGAATCGTCACAGAAGCTGAGGCTGTGGCTGGGAACTTTTGACAGAGCAGAAGATGCTGCCATGGCTTATGACTGTGCTGCTACGCTTCTCAGAGGAAGAAATGCCAAGACTAACTTCCACTCTCCTTCAGGCTCAGGGATGATCGCCAATACACGCAAGGAAATTTGCAGCTTTTTGCGTAAGAATCCAAGGGCTTACCACATTCTTAAGCATGCAATCATGAAAAACCATCATGCACTTGCTTCCTCCACAGCCTTGCCTTGGAACAACCAGACCAGTAACATTTCGAGAGACGGGTTCGAGACGCTTGTTGAAGAAACCATAGTTTGCTGTTCCACTACTAGTTCTGAACAAGCTTCTTCTTCTTCCTCTTCTGGGTGCTGTGGGGTCTCATTTGGTAGTTCTAAGGTTTATTCTTCTGTGGTTGTGGATCCATCTTTCAGCGCCTCGTTTTGTGGGGAAGAAACCCTGTAA 651 0.4639 MLKKQTLASNLMENLEISSECPLPPQNSNKGQSSGNKRHERKYLGVRQRPSGRWVAEIKESSQKLRLWLGTFDRAEDAAMAYDCAATLLRGRNAKTNFHSPSGSGMIANTRKEICSFLRKNPRAYHILKHAIMKNHHALASSTALPWNNQTSNISRDGFETLVEETIVCCSTTSSEQASSSSSSGCCGVSFGSSKVYSSVVVDPSFSASFCGEETL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00107 216 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Accr23g00107 216 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Accr23g00107 216 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 165 - -
Accr23g00107 216 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Accr23g00107 216 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Accr23g00107 216 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Accr23g00107 216 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Accr23g00107 216 SUPERFAMILY DNA-binding domain 42 99 IPR016177 GO:0003677
Accr23g00107 216 MobiDBLite consensus disorder prediction 18 44 - -
Accr23g00107 216 CDD AP2 42 98 IPR001471 GO:0003700|GO:0006355
Accr23g00107 216 MobiDBLite consensus disorder prediction 18 33 - -
Accr23g00107 216 FunFam ethylene-responsive transcription factor RAP2-11 41 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00107 25 111 AP2-EREBP Transcription Factor Family AT5G19790 56.180 8.29e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr23g00107 AP2 6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00107 K09286 - gmx:100800716 216.853