Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00097 ATGGGGTGCTCGTTTTCCGGGTTGAATGTATTGTATGACAACGTAAACGGGGGCACCGACGTGTGGATCAACGAGAACCGATTCCGCATCTTGAGGCAGCTCGGCGAAGGTGGCTTTTCCTACATCTACTTGGTCAAGGAGGTGGTCACCGACTCCTCTCCCGCCTTATCTGGCAGTGGTCTCTCTAAGAAGCTCAAAGACTCTTCCCATATCTCCAACGATGGTACTTATGCTATGAAAAAGGTCCTCATTCAAAACAATGAACAGCTGGAGTTGGTGAAGGAGGAGATCCGTGTTTCATCACTCTTCAGTCATCCTAATTTGCTTCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCAACCAAAGAAACATCTTGGACCCATGAAGCATACCTGTTGTTTCCTGTTCATTTGGATGGAACATTGCTTGACATTGCCCAAACTATGAAAGCCAAGAAAGAGTTCTTTTCCACGTCAGATGTGCTTCACATATTTCAACAGCTTGCTGCAGGACTCGAGCACATGCACAATATGGATCCTCCGCACACACATAATGACGTCAAACCTGGTAATGTGGTGATAACACGCAGAAAGGGACAACCACCTCTTGCTATACTCATGGATTTTGGTAGTACTCGACCTGCCAGGCAGCGAATTCGCTCTCGATCTGAGGCTCTGCAGTTGCAGGAATGGGCAGCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAGCTATGGGATTGCCCTAACCATGCAGATATAGATGAGAGGACTGATGTCTGGTCACTGGGATGCACGCTGTATGCAATAATGTACGGGGTATCTCCGTTTGAATATGCCCTTGAAGAAGCTGGTGGAAGCCTGCAAGTGGTCATTGCAAATGCTCAAATCAAATGGCCGGCTGGACCTAAGTCTTCTTATCCCGATGCTGTTCATCAGTTTGTGACATGGATGCTTCAACCTCAGGCTGCTGTGCGGCCTCGAATGAACGACATCGTTATCCATGTCGAAAAATTGATCGCCAAGTTCTCTCATTGA 1041 0.4745 MGCSFSGLNVLYDNVNGGTDVWINENRFRILRQLGEGGFSYIYLVKEVVTDSSPALSGSGLSKKLKDSSHISNDGTYAMKKVLIQNNEQLELVKEEIRVSSLFSHPNLLPLLDHAIISVKPTKETSWTHEAYLLFPVHLDGTLLDIAQTMKAKKEFFSTSDVLHIFQQLAAGLEHMHNMDPPHTHNDVKPGNVVITRRKGQPPLAILMDFGSTRPARQRIRSRSEALQLQEWAAEHCSAPFRAPELWDCPNHADIDERTDVWSLGCTLYAIMYGVSPFEYALEEAGGSLQVVIANAQIKWPAGPKSSYPDAVHQFVTWMLQPQAAVRPRMNDIVIHVEKLIAKFSH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00097 346 SMART serkin_6 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr23g00097 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
Accr23g00097 346 Gene3D Phosphorylase Kinase; domain 1 13 136 - -
Accr23g00097 346 ProSiteProfiles Protein kinase domain profile. 28 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr23g00097 346 CDD STKc_16 27 342 - -
Accr23g00097 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
Accr23g00097 346 Gene3D Transferase(Phosphotransferase) domain 1 139 344 - -
Accr23g00097 346 Pfam Protein kinase domain 58 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00097 33 299 EF-hand Containing Proteins AT4G04710 23.881 2.53e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Accr23g00097 Pkinase 8.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00097 K08856 - mnt:21388794 598.586