LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr23g00091	ATGGATTGGAATACAAGCTTAGAGCAACAGCATCTTCACCATCCTTGTCCTGCTCAGAAACCCATTCTGAACTCAAGCTTACTCAACATGGAAACTGGGGAAGGCCATGAAGGTTCACATGTCTTAGGTCATGGTCAAGGCTTACACTATATTCCATTTTACTACTCTCAGTTACACCTTCCCAACAACCCAGTTCTGTTTATAGACCATAAATCCTCTCCAAACACTTCATCTAACAGTAACAACAACAACATCAATGATTCTGGCGAAGGGAATGTTGTTGCTGATGAGAGAAAGAAGAAAAGAATGTTCTCCAACAGAGAATCTGCTCGCAGGTCGAGGATGAGGAAGAAACAGCAGATAGAAAACCTTCAGTATCAAGTGGATCATCTTCAGACCATGAACCATCAACTTTCCCAGAAGATCATTTACTTGTTGGAATGTAACCAGCAGATCCTCCAGCAGAACGGTCAGCTCAAAGATAAAATTACTACACTTCAAATGACCCTCTCTGACTTGTTAGTTCCTCTGCCTCGTGATGACGAAGCCAATAATCACATCACCAATGCCCTCATTGCCGAGCCTTCTGCTCCACCAGTTGCCAGTTCCGAGGCATAG	618	0.4353	MDWNTSLEQQHLHHPCPAQKPILNSSLLNMETGEGHEGSHVLGHGQGLHYIPFYYSQLHLPNNPVLFIDHKSSPNTSSNSNNNNINDSGEGNVVADERKKKRMFSNRESARRSRMRKKQQIENLQYQVDHLQTMNHQLSQKIIYLLECNQQILQQNGQLKDKITTLQMTLSDLLVPLPRDDEANNHITNALIAEPSAPPVASSEA	205

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr23g00091	205	MobiDBLite	consensus disorder prediction	69	90	-	-
	Accr23g00091	205	CDD	bZIP_plant_GBF1	99	147	IPR045314	GO:0003700\|GO:0006355
	Accr23g00091	205	SUPERFAMILY	Leucine zipper domain	98	154	IPR046347	GO:0003700\|GO:0006355
	Accr23g00091	205	Pfam	bZIP transcription factor	98	156	IPR004827	GO:0003700\|GO:0006355
	Accr23g00091	205	PANTHER	BASIC LEUCINE ZIPPER 43-RELATED	68	182	IPR044521	-
	Accr23g00091	205	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	101	116	IPR004827	GO:0003700\|GO:0006355
	Accr23g00091	205	FunFam	BZIP transcription factor	96	147	-	-
	Accr23g00091	205	Coils	Coil	107	141	-	-
	Accr23g00091	205	SMART	brlzneu	94	158	IPR004827	GO:0003700\|GO:0006355
	Accr23g00091	205	MobiDBLite	consensus disorder prediction	69	97	-	-
	Accr23g00091	205	Gene3D	-	96	150	-	-
	Accr23g00091	205	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	96	145	IPR004827	GO:0003700\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr23g00091	30	202	bZIP Transcription Factor Family	AT5G60830	41.989	2.61e-31	111

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Accr23g00091		bZIP_1	7.8e-13	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr23g00091	-		-	aprc:113874797	227.254