Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00083 ATGCAATCCATCGAAGAAGGTGGATTTCTCCCTGCCGCGGCTGCCGGTGAAGACAGGAGGCTCAGACCTCACAGAAACGACAACCAGAACCCCCAGTCGTTGAAATGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAGGACTTGCCGGAGATACTGGACCAAGGGCGGTATCCTCCGTAACGTCCCTGTCGGCGGCCGTTGTCGGAAGACTAAGCGGTCCAAGCCCAAGAACTCTCCCTCGGCCGCTGCGACAACAGCACCACCGCCGGCCCAGTCGTCATCGCAACAAAAACGCGAGCTCAAGGCGTCCACCTCTCATTCTAGCAGCGAAAACTCCAGTCTTACCGCGGCCGTCACCACAGAAGTGGTTTCAGCTCCTTCATCTAACTCCGCGTCCAATAACTTGTTGGACAATCTTCAGGATTCGAGCCTCTTCGTCCATTCTAGTCCGAAGCCTAGCTCGGAGCCAGGCGTCACCGAACAAGGAGTAGACTCCGGGATTTTCTCGGAGATAGAGAACTTAACGAGCCTGGTCGCACCGACTAACGAGAACCTGGCTTTTGGATACGGGAACATCACCGACGCGTCGTCGTTCCAGCTGTGCGGCCAGTGGCAGAAAGGGATGAACACGAGCGATCGTCGTAATCAGGAGTTGAAGTGGCCGGAGATGACGGCGACGGGATGGCTGATGGAGGAGACGGTGGCGGTGGATTGGCGGGCGAGATCGGATGATCAAGGTTTCTTTGATGTCGGTAACACACTAGATGAGGGTGTGTGGAGTCACAATCAGTGGAATGAAGACAATTCGAGTCTTTTTCATCTACCTTGA 876 0.5525 MQSIEEGGFLPAAAAGEDRRLRPHRNDNQNPQSLKCPRCDSLNTKFCYYNNYNLSQPRHFCRTCRRYWTKGGILRNVPVGGRCRKTKRSKPKNSPSAAATTAPPPAQSSSQQKRELKASTSHSSSENSSLTAAVTTEVVSAPSSNSASNNLLDNLQDSSLFVHSSPKPSSEPGVTEQGVDSGIFSEIENLTSLVAPTNENLAFGYGNITDASSFQLCGQWQKGMNTSDRRNQELKWPEMTATGWLMEETVAVDWRARSDDQGFFDVGNTLDEGVWSHNQWNEDNSSLFHLP 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00083 291 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
Accr23g00083 291 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Accr23g00083 291 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 186 IPR045174 GO:0003700|GO:0006355
Accr23g00083 291 MobiDBLite consensus disorder prediction 92 131 - -
Accr23g00083 291 MobiDBLite consensus disorder prediction 78 131 - -
Accr23g00083 291 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
Accr23g00083 291 MobiDBLite consensus disorder prediction 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00083 18 291 C2C2-Dof Transcription Factor Family AT5G60850 37.857 3.01e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr23g00083 zf-Dof 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00083 - - pcin:129308249 318.546