Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00073 ATGGATTCTTGGAGATACGGTTCTGGGGACAAGGGTTTTGTGGCCAATAATACACTTCCACCTCCTAATACGCTTACGAGAAGCAAAAATTCCTTACTAGGTTGGGAATTGAAAACCCAATCTGGTTTTTCCAACGACATTTTGGCCTCGGCTCAACAACATCTAGAGAGTCAAGTTTGTGAGGAGATGGGATTTCCAGAAATGTTGGGGAAACATCAGTTGTCTAATGACCCGCTTGGTTGTATTTTGAATGATCCAAATTCATTTTCTGGAGGTGAAGACTCTGCTTCAAGGCTTTCAAACTCGGTGGTTGAATCTAATAGCCGGGATTCTCTCATTGATTTGAAGTTAGGAAGAGTTGGTGATCAAAGAGATGCCACTGAATCACCATTTTCTAAAGGTATTCCTCTTTTGTGTTCTTCAGAGTCATCTACGACCCCCAAGAGAGTTAAAACTTCAGGGTTTCAGTCACAGACTTCTTACTGCCAAGTCTATGGCTGCAACAAGGATCTAAGCGCCTGTAAAGACTACCACAAGAGGCACAAAGTTTGTGAGATTCACTCAAAGACTTCTAAAGTCATAGTGAATGGCATAGAGCAAAGGTTTTGTCAACAATGTAGCAGGTTTCATTTGCTGGCTGAATTTGATGATGTTAAGCGCAGCTGTCGCAAACGCCTTGCAGGCCATAATGAGCGTCGTAGAAAGCCACAGATGAGTACTCACTCTGGAAAAGGCAGGAGGTTGCTTCAGTCATATAATGATAGCAGATTCCAAGGCAGCATGCTAACAACAGCATCTTTTATCTGCCAAGAGATACTCCCTAGTGGCGTTTTGTACGGCGCTGATAACTGGTGGAAACCTATAAAGTCCCAAGGTGGGAATGATTTTAGGCATATCTCTGCTATGCCTATCACAAATGGGCATTCACACTCAAGATCTCTGCTTCCTTCATATGCTGAAAAGCAATATCCGCCTATGAATGAAACCAGCGGCGCTATATCCACTACGGGAAGCATATTCTGTGAGAACAACAACCTTTATCCACCTGCTCTTGGATATGCTTATTCTTCTGGTCCACGATCATCGTACCAAGACACCTTCTTAGGAAGTGAAGACTTTAATAATGTTTTTGATACAGCATCAACCATTCAGGGATTATCAGGACTCACAGACTCAGGTTGTGCTCTCTCTCTTCTGTCATCTCAATCCCGTAACTCATCAAGCCATTCATTTGCAATCCCCGCTGGTCGCCCTGTGGTTACTCCGAGAAGTCACGGCCACTACAGCCTGAGTCATGCCTCTGAAAAGATCATGGGAATAAGCTCTCAGGCTTCAACAGGTGGGGTGTCAGCATCAGGTAGTTTTCCATCAGAAATAAATCATTCTGATGGAGGTCGCTTTGGCCCTGTGTTGATATTAGACAATAATGACATTGTCAACTTAGAAATCACGGATGGAATTTTTCAAGGGTCAGATGCTGCGAATATGAAAGCCTGTGAAGACGGCCCCACCATTGACTTGCTTCAACTGTCATCACAACTTCACCGAGTTGAGCATCAACGACAATCCTTGCAGGTGAAGCAAGAACATGATTCTTTTTGCTCCCTCCGGATTACTTAG 1620 0.4383 MDSWRYGSGDKGFVANNTLPPPNTLTRSKNSLLGWELKTQSGFSNDILASAQQHLESQVCEEMGFPEMLGKHQLSNDPLGCILNDPNSFSGGEDSASRLSNSVVESNSRDSLIDLKLGRVGDQRDATESPFSKGIPLLCSSESSTTPKRVKTSGFQSQTSYCQVYGCNKDLSACKDYHKRHKVCEIHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDVKRSCRKRLAGHNERRRKPQMSTHSGKGRRLLQSYNDSRFQGSMLTTASFICQEILPSGVLYGADNWWKPIKSQGGNDFRHISAMPITNGHSHSRSLLPSYAEKQYPPMNETSGAISTTGSIFCENNNLYPPALGYAYSSGPRSSYQDTFLGSEDFNNVFDTASTIQGLSGLTDSGCALSLLSSQSRNSSSHSFAIPAGRPVVTPRSHGHYSLSHASEKIMGISSQASTGGVSASGSFPSEINHSDGGRFGPVLILDNNDIVNLEITDGIFQGSDAANMKACEDGPTIDLLQLSSQLHRVEHQRQSLQVKQEHDSFCSLRIT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00073 539 Gene3D - 153 223 IPR036893 GO:0003677|GO:0005634
Accr23g00073 539 Pfam SBP domain 162 235 IPR004333 GO:0003677
Accr23g00073 539 Coils Coil 507 527 - -
Accr23g00073 539 SUPERFAMILY SBT domain 161 240 IPR036893 GO:0003677|GO:0005634
Accr23g00073 539 MobiDBLite consensus disorder prediction 1 22 - -
Accr23g00073 539 ProSiteProfiles Zinc finger SBP-type profile. 159 236 IPR004333 GO:0003677
Accr23g00073 539 MobiDBLite consensus disorder prediction 226 246 - -
Accr23g00073 539 FunFam Squamosa promoter-binding-like protein 14 153 223 - -
Accr23g00073 539 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 88 526 IPR044817 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00073 1 279 SBP-box Gene Family AT1G69170 38.676 4.60e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr23g00073 SBP 2.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00073 - - gmx:100777766 643.654