Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr23g00065 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTAGAGCGCAAGGAAGAGGGAAAGAGCCAAAGTGGCTCATTGAATGAACAGACAACAGACCTTGAACGTGGTGAAGCAGCAACAAATGTGGGATTTGGCAGGGTGCTCTCACTTGCAAAGCCTGAAGCTAGGAAGCTGATTTTCGCAACTCTGGCTCTTTTAATTGCATCCACATCAGAAATTTTAGTTCCAAAATTTGGTGGGAAGGTAATTGATATTGTCTCAGGGGATATTCAAACTCCTGAAGATAAAGCTAAAGCTTTGGAAGCAGTCAAGAGCACCATACTGTACATTTTTATGATTGTTGTTGTTGGATCAGTTTCAACAGCACTTGATGGTTGGCTTTTTTCCTCAGCAAGTGAAAGAATTGTTGCTCGGCTTAGAAAAAGATTATTTAGTCACCTCATAATCCAGGAGATAGCCTTCTTTGACGTTACCCGTACCGGGGAACTTATGAGTAGGCTCTCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCACTGAGTGCCTTATCAACTGCATTTATTGGTCTTGGCTTCATGTTTTGGACGTCATGGAAGTTAACATTGTTGGCTTTAGCTGTTGTTCCTGCTACTTTTATTGCTGCTCGTAAATTCGGTTGGTTCCTACGCGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCTGCTTCAATAGCTGAGGAATCCTTTGGCGCCATAAGGACAGTAAGATCTTTTGCCCAAGAAGAATATGAAATATTACGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGGCTTAAACAAGCTAAAGTTGTGGGACTCTTTTCTGGTGGCATGTACACAGCAACTTCCTTGCCAATTATTATAGTTGTCATCTATGGGGCATATTTGACAACTACAGGTTCCATGTCCCCCGGTGATCTTACGTCCTTTATTCTTTATAGTCTCACAGGATTGTATACCATGGCCATGAAAGCTGTGGGTTCAAGCAGAAGGGTGTTTCACCTTATTGATCTTGAATCAACAATGCCAATGTCAGGAAATAAATGTCCTCTGGGAGAACAAGATGGGGAGGTGGAGCTAAATGATGTCTGGTTTGCATATCCATCTCGTCCTAGTCATATGGTACTTAAGGGAATTACAATGAAATTGCAGTCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTACGACCCAACCAAGGGAAAGATCCTGCTGAATGGGGTTTCACTGGTAGAAGTATCACATGAGCATATGCACAAGAAGATCAGTATTGTGAGTCAAGAGCCTGTACTTTTTAACTGTTCCATTGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTAAATCCTGTTGATATAGAAAATGCAGCAAAAATGGCAAATGCACATGAATTCATATCAAAATTCATAGATAAATACAAGACCCATGTTGGGGAGCGTGGGGTAAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCCAGAGCTCTACTTATGGACCCAAAAATTCTTCTCCTTGATGAAGCCACTAGTGCCCTCGATGCTGAAAGCGAATATTTAGTACAAGGTGCTTTGGACAGACTGATGAAGGGAAGGACAGTTCTAGTCATAGCTCATAGGCTTTCAACTGTGAAGAGTGCTGATAGAGTAGTGGTTGTTTCTGATGGTGAAATTGTGGAGAGTGGGACCCATGAAGAACTTATCAGCAACAACAGTGTCTATTCTGCTCTAATCAGTAGACAGCTCCAAACAACGAAACCTCAATATCTTGTTTCTTAA 1866 0.4164 MGSTSETAPLLERKEEGKSQSGSLNEQTTDLERGEAATNVGFGRVLSLAKPEARKLIFATLALLIASTSEILVPKFGGKVIDIVSGDIQTPEDKAKALEAVKSTILYIFMIVVVGSVSTALDGWLFSSASERIVARLRKRLFSHLIIQEIAFFDVTRTGELMSRLSEDTQIIKNAATTNLSHALSALSTAFIGLGFMFWTSWKLTLLALAVVPATFIAARKFGWFLRELSQKTQDAAAAAASIAEESFGAIRTVRSFAQEEYEILRYSKKVDETLKLGLKQAKVVGLFSGGMYTATSLPIIIVVIYGAYLTTTGSMSPGDLTSFILYSLTGLYTMAMKAVGSSRRVFHLIDLESTMPMSGNKCPLGEQDGEVELNDVWFAYPSRPSHMVLKGITMKLQSGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGVSLVEVSHEHMHKKISIVSQEPVLFNCSIEENIAYGFDGKVNPVDIENAAKMANAHEFISKFIDKYKTHVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQGALDRLMKGRTVLVIAHRLSTVKSADRVVVVSDGEIVESGTHEELISNNSVYSALISRQLQTTKPQYLVS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr23g00065 621 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 609 IPR003439 GO:0005524
Accr23g00065 621 Pfam ABC transporter 390 540 IPR003439 GO:0005524
Accr23g00065 621 Gene3D ABC transporter type 1, transmembrane domain 108 369 IPR036640 GO:0005524|GO:0016020
Accr23g00065 621 Pfam ABC transporter transmembrane region 56 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr23g00065 621 SUPERFAMILY ABC transporter transmembrane region 44 352 IPR036640 GO:0005524|GO:0016020
Accr23g00065 621 FunFam ABC transporter B family member 25 108 369 - -
Accr23g00065 621 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 57 337 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr23g00065 621 SMART AAA_5 399 586 IPR003593 GO:0016887
Accr23g00065 621 FunFam ABC transporter B family member 25 370 612 - -
Accr23g00065 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 610 IPR027417 -
Accr23g00065 621 Gene3D - 370 614 IPR027417 -
Accr23g00065 621 ProSitePatterns ABC transporters family signature. 512 526 IPR017871 GO:0005524|GO:0016887
Accr23g00065 621 PIRSF ABC_prm/ATPase_B 3 619 - -
Accr23g00065 621 MobiDBLite consensus disorder prediction 1 30 - -
Accr23g00065 621 CDD ABC_MTABC3_MDL1_MDL2 372 610 - -
Accr23g00065 621 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 26 614 IPR039421 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr23g00065 73 610 Calmodulin-binding Proteins AT2G36910 37.975 2.70e-99 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr23g00065 - - qsa:O6P43_022927 925.235